104 Organisms

Organism Division Experiments # Carbon Sources # Nitrogen Sources # Stress Compounds # Other Conditions Updated Annotations
Acidovorax sp. GW101-3H11 Betaproteobacteria 143 21 14 30 12 62
Acinetobacter radioresistens SK82 Gammaproteobacteria 57 5 15 1 5  
Agrobacterium fabrum C58 Alphaproteobacteria 953 98 45 97 116  
Alteromonas macleodii MIT1002 Gammaproteobacteria 52 52  
Azospirillum brasilense Sp245 Alphaproteobacteria 167 15 19 20 18 28
Azospirillum sp. SherDot2 Alphaproteobacteria 83 15  
Bacteroides ovatus ATCC 8483 Bacteroidetes 129 54 12  
Bacteroides stercoris CC31F Bacteroidetes 94 37 12  
Bacteroides thetaiotaomicron VPI-5482 Bacteroidetes 868 66 16 62 214 83
Bifidobacterium breve UCC2003 Actinobacteria 747 50 121 207 3
Bosea sp. OAE506 Alphaproteobacteria 128 41 4 4  
Brevundimonas sp. GW460-12-10-14-LB2 Alphaproteobacteria 31 14  
Burkholderia phytofirmans PsJN Betaproteobacteria 321 49 16 13 115 86
Castellaniella sp019104865 MT123 Betaproteobacteria 110 22  
Caulobacter crescentus NA1000 Alphaproteobacteria 313 14 23 32 74 35
Caulobacter crescentus NA1000 Δfur Alphaproteobacteria 15 2 1  
Cupriavidus basilensis FW507-4G11 Betaproteobacteria 143 38 17 21 6 50
Dechlorosoma suillum PS Betaproteobacteria 104 7 16 19 5
Desulfovibrio vulgaris Hildenborough JW710 Deltaproteobacteria 763 29 42 119 17
Desulfovibrio vulgaris Miyazaki F Deltaproteobacteria 188 5 5 34 37 15
Dickeya dadantii 3937 Gammaproteobacteria 76 1 1 7  
Dickeya dianthicola 67-19 Gammaproteobacteria 39 1 5  
Dickeya dianthicola ME23 Gammaproteobacteria 77 1 1 8  
Dinoroseobacter shibae DFL-12 Alphaproteobacteria 196 20 19 41 8 38
Dyella japonica UNC79MFTsu3.2 Gammaproteobacteria 69 10 11 21 1 21
Echinicola vietnamensis KMM 6221, DSM 17526 Bacteroidetes 221 25 18 26 2 60
Enterobacter asburiae PDN3 Gammaproteobacteria 54 4 5  
Enterobacter sp. TBS_079 Gammaproteobacteria 337 87 46 177  
Erwinia tracheiphila SCR3 Gammaproteobacteria 38 32  
Escherichia coli BL21 Gammaproteobacteria 85 53  
Escherichia coli BW25113 Gammaproteobacteria 1179 46 16 110 315 16
Escherichia coli ECOR27 Gammaproteobacteria 17 10  
Escherichia coli ECOR38 Gammaproteobacteria 16 9  
Escherichia coli ECRC101 Gammaproteobacteria 9 5  
Escherichia coli ECRC101 Gammaproteobacteria 7 4  
Escherichia coli ECRC102 Gammaproteobacteria 9 5  
Escherichia coli ECRC62 Gammaproteobacteria 10 6  
Escherichia coli HS(pFamp)R (ATCC 700891) Gammaproteobacteria 77 36  
Escherichia coli Nissle 1917 Gammaproteobacteria 26 14  
Escherichia fergusonii Becca Gammaproteobacteria 63 21  
Fusobacterium nucleatum SB010 Fusobacteriota 20 2 12  
Herbaspirillum seropedicae SmR1 Betaproteobacteria 244 32 4 13 47 57
Hydrogenophaga sp. GW460-11-11-14-LB1 Betaproteobacteria 51 6  
Kangiella aquimarina DSM 16071 Gammaproteobacteria 116 41 10 6
Klebsiella michiganensis M5al Gammaproteobacteria 610 43 40 24 184 55
Lysobacter sp. OAE881 Gammaproteobacteria 143 24 4 6 1
Magnetospirillum magneticum AMB-1 Alphaproteobacteria 36 1 34  
Marinobacter adhaerens HP15 Gammaproteobacteria 282 19 16 43 36 36
Methanococcus maripaludis JJ Euryarchaeota 217 4 25 42  
Methanococcus maripaludis S2 Euryarchaeota 700 43 73 91 2
Mucilaginibacter yixingensis YX-36 DSM 26809 Bacteroidetes 63 11 10 10  
Mycobacterium tuberculosis H37Rv Actinomycetes 101 18 8 20 1  
Pantoea sp. MT58 Gammaproteobacteria 309 6 4 10 39  
Parabacteroides merdae CL09T00C40 Bacteroidetes 56 19 10  
Paraburkholderia bryophila 376MFSha3.1 Betaproteobacteria 128 33 21 18
Paraburkholderia graminis OAS925 Betaproteobacteria 488 73 4 42 76  
Paraburkholderia sabiae LMG 24235 Betaproteobacteria 60 15 4 12  
Pectobacterium carotovorum WPP14 Gammaproteobacteria 31 2  
Pedobacter sp. GW460-11-11-14-LB5 Bacteroidetes 185 19 23 29 1 57
Phaeobacter inhibens DSM 17395 Alphaproteobacteria 282 33 15 45 15 78
Phocaeicola dorei CL03T12C01 Bacteroidetes 158 62 4  
Phocaeicola vulgatus CL09T03C04 Bacteroidetes 297 42 5 101  
Pontibacter actiniarum KMM 6156, DSM 19842 Bacteroidetes 112 26 2 2
Pseudomonas fluorescens FW300-N1B4 Gammaproteobacteria 191 39 22 34 32 60
Pseudomonas fluorescens FW300-N2C3 Gammaproteobacteria 198 45 19 36 24 122
Pseudomonas fluorescens FW300-N2E2 Gammaproteobacteria 388 42 26 79 27 116
Pseudomonas fluorescens FW300-N2E3 Gammaproteobacteria 216 46 30 42 17 115
Pseudomonas fluorescens GW456-L13 Gammaproteobacteria 116 28 28 21 2 80
Pseudomonas fluorescens SBW25 Gammaproteobacteria 38 9  
Pseudomonas fluorescens SBW25-INTG Gammaproteobacteria 1213 72 1 7 90  
Pseudomonas putida KT2440 Gammaproteobacteria 989 106 60 31 186 41
Pseudomonas simiae WCS417 Gammaproteobacteria 552 52 11 32 152 118
Pseudomonas sp. RS175 Gammaproteobacteria 385 78 1 8  
Pseudomonas sp. S08-1 Gammaproteobacteria 41 6  
Pseudomonas stutzeri RCH2 Gammaproteobacteria 424 30 19 52 81 74
Pseudomonas syringae pv. syringae B728a Gammaproteobacteria 193 12 111 16  
Pseudomonas syringae pv. syringae B728a ΔmexB Gammaproteobacteria 94 75 5  
Rahnella sp. WP5 Gammaproteobacteria 123 7 3 13  
Ralstonia solanacearum GMI1000 Betaproteobacteria 110 10 11 43  
Ralstonia solanacearum IBSBF1503 Betaproteobacteria 100 11 33  
Ralstonia solanacearum PSI07 Betaproteobacteria 81 11 26  
Ralstonia solanacearum UW163 Betaproteobacteria 8 4  
Ralstonia sp. UNC404CL21Col Betaproteobacteria 129 27 3 48  
Rhizobium sp. OAE497 Alphaproteobacteria 116 40 3 2  
Rhodanobacter denitrificans FW104-10B01 Gammaproteobacteria 314 13 39 52 2
Rhodanobacter denitrificans MT42 Gammaproteobacteria 23 6 3  
Rhodanobacter sp. FW510-T8 Gammaproteobacteria 29 6 4  
Rhodopseudomonas palustris CGA009 Alphaproteobacteria 175 16 3 31  
Rhodospirillum rubrum S1H Alphaproteobacteria 60 4 19  
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 Gammaproteobacteria 79 57  
Serratia liquefaciens MT49 Gammaproteobacteria 36 8 2  
Shewanella amazonensis SB2B Gammaproteobacteria 190 23 16 35 18 59
Shewanella loihica PV-4 Gammaproteobacteria 160 13 40 10 16
Shewanella oneidensis MR-1 Gammaproteobacteria 270 16 17 42 57 46
Shewanella sp. ANA-3 Gammaproteobacteria 109 23 7 29 3 37
Sinorhizobium meliloti 1021 Alphaproteobacteria 243 53 13 21 24 121
Sphingomonas koreensis DSMZ 15582 Alphaproteobacteria 166 11 5 47 15 37
Synechococcus elongatus PCC 7942 Cyanobacteria 176 4 29 46 2
Variovorax sp. OAS795 Betaproteobacteria 111 47 9  
Variovorax sp. SCN45 Betaproteobacteria 61 15  
Vibrio cholerae E7946 ATCC 55056 Gammaproteobacteria 45 44  
Xanthomonas campestris pv. campestris strain 8004 Gammaproteobacteria 98 4 32 1

Total number of genome-wide fitness experiments: 20,753