Gammaproteobacteria: Pseudomonas fluorescens FW300-N2E2
NCBI taxonomy id: 294
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| anaerobic | 1 | 2 |
| carbon source | 43 | 120 |
| denitrifying | 1 | 9 |
| lb | 2 | 22 |
| motility | 1 | 5 |
| nitrogen source | 26 | 61 |
| resistance | 4 | 7 |
| stress | 82 | 158 |
| vitamin | 2 | 4 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
867 genes with specific phenotypes, and 428 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| anaerobic | 1 | 7 |
| carbon source | 41 | 372 |
| denitrifying | 1 | 50 |
| lb | 1 | 3 |
| motility | 1 | 74 |
| nitrogen source | 25 | 192 |
| resistance | 4 | 29 |
| stress | 68 | 418 |
| vitamin | 1 | 4 |
Updated Annotations
Updated annotations for 116 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 688 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 5133 of 6175 genes.