Gammaproteobacteria: Dyella japonica UNC79MFTsu3.2
NCBI taxonomy id: 1380365
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 10 | 19 |
| lb | 1 | 4 |
| nitrogen source | 11 | 11 |
| stress | 21 | 35 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
233 genes with specific phenotypes, and 63 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 9 | 66 |
| lb | 1 | 1 |
| nitrogen source | 11 | 27 |
| stress | 17 | 150 |
Updated Annotations
Updated annotations for 21 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 405 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3700 of 4446 genes.