Deltaproteobacteria: Desulfovibrio vulgaris Hildenborough JW710
NCBI taxonomy id: 882
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| fermentative growth | 5 | 17 |
| nitrogen source | 36 | 129 |
| nutrient | 64 | 202 |
| respiratory growth | 32 | 145 |
| rich | 1 | 2 |
| stress | 60 | 268 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
542 genes with specific phenotypes, and 27 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| fermentative growth | 1 | 8 |
| nitrogen source | 25 | 247 |
| nutrient | 19 | 87 |
| respiratory growth | 8 | 174 |
| rich | 1 | 13 |
| stress | 25 | 315 |
Updated Annotations
Updated annotations for 17 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 277 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 2741 of 3668 genes.