Betaproteobacteria: Paraburkholderia bryophila 376MFSha3.1
NCBI taxonomy id: 1169143
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| unrecorded | 1 | 1 |
| carbon source | 38 | 91 |
| control | 1 | 1 |
| ecofab | 1 | 1 |
| in planta | 6 | 15 |
| lb | 1 | 2 |
| phage | 1 | 3 |
| supernatant | 7 | 14 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
244 genes with specific phenotypes, and 63 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| 1 | 8 | |
| carbon source | 29 | 176 |
| ecofab | 1 | 3 |
| in planta | 6 | 46 |
| phage | 1 | 16 |
| supernatant | 3 | 12 |
Updated Annotations
Updated annotations for 18 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 420 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 5153 of 6609 genes.