Bacteroidetes: Phocaeicola vulgatus CL09T03C04
NCBI taxonomy id: 997891
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 42 | 161 |
| mouse | 4 | 103 |
| nitrogen source | 17 | 33 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
292 genes with specific phenotypes, and 28 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 33 | 146 |
| mouse | 4 | 121 |
| nitrogen source | 5 | 70 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 489 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3346 of 4020 genes.