Gammaproteobacteria: Pseudomonas sp. BP01
NCBI taxonomy id: 286
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| mixed community | 4 | 15 |
| mixed community control | 2 | 9 |
| supernatant | 2 | 22 |
| supernatant control | 2 | 7 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
6 genes with specific phenotypes, and 0 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| mixed community | 3 | 5 |
| mixed community control | 1 | 1 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 171 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 4213 of 5816 genes.