Actinomycetes: Mycobacterium tuberculosis H37Rv
NCBI taxonomy id: 83332
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 20 | 40 |
| nitrogen source | 10 | 20 |
| no stress control | 1 | 24 |
| pH | 2 | 6 |
| stress | 70 | 146 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
184 genes with specific phenotypes, and 14 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 18 | 66 |
| nitrogen source | 2 | 2 |
| no stress control | 1 | 4 |
| pH | 1 | 23 |
| stress | 45 | 99 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 30 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 2881 of 4079 genes.