Gammaproteobacteria: Enterobacter sp. TBS_079
NCBI taxonomy id: 547
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 87 | 96 |
| in planta | 2 | 3 |
| mixed community | 135 | 170 |
| mixed community control | 1 | 1 |
| motility; inner cut | 1 | 1 |
| motility; outer cut | 1 | 2 |
| nitrogen source | 46 | 46 |
| supernatant | 24 | 36 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
722 genes with specific phenotypes, and 166 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 62 | 264 |
| in planta | 2 | 217 |
| mixed community | 67 | 200 |
| motility; inner cut | 1 | 19 |
| motility; outer cut | 1 | 64 |
| nitrogen source | 38 | 165 |
| supernatant | 9 | 25 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 396 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 4227 of 4774 genes.