Gammaproteobacteria: Pseudomonas aeruginosa PA14
NCBI taxonomy id: 652611
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 56 | 190 |
| no stress control | 1 | 24 |
| phage | 1 | 52 |
| stress | 38 | 118 |
| survival | 13 | 32 |
| toxin | 1 | 1 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
879 genes with specific phenotypes, and 417 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 56 | 422 |
| phage | 1 | 58 |
| stress | 27 | 458 |
| survival | 10 | 69 |
| toxin | 1 | 1 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 573 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 4900 of 5984 genes.