Betaproteobacteria: Acidovorax sp. GW101-3H11
NCBI taxonomy id: 12916
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 21 | 41 |
| lb | 1 | 10 |
| motility | 1 | 3 |
| nitrogen source | 14 | 14 |
| pH | 1 | 12 |
| phage | 1 | 3 |
| stress | 30 | 56 |
| temperature | 1 | 4 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
343 genes with specific phenotypes, and 85 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 19 | 91 |
| lb | 1 | 6 |
| motility | 1 | 4 |
| nitrogen source | 14 | 131 |
| pH | 1 | 42 |
| phage | 1 | 6 |
| stress | 22 | 148 |
| temperature | 1 | 3 |
Updated Annotations
Updated annotations for 62 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 386 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3935 of 5019 genes.