Alphaproteobacteria: Rhodospirillum rubrum S1H
NCBI taxonomy id: 269796
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| anaerboic nitrogen source | 7 | 18 |
| carbon source | 4 | 21 |
| light | 2 | 15 |
| smn_rich | 1 | 6 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
111 genes with specific phenotypes, and 0 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| anaerboic nitrogen source | 2 | 22 |
| carbon source | 2 | 48 |
| light | 2 | 43 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 244 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 2913 of 5243 genes.