Gammaproteobacteria: Pantoea sp. MT58
NCBI taxonomy id: 53335
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 6 | 54 |
| nitrogen source | 5 | 15 |
| no stress control | 2 | 15 |
| stress | 18 | 56 |
| survival | 37 | 169 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
380 genes with specific phenotypes, and 35 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 6 | 108 |
| nitrogen source | 4 | 55 |
| no stress control | 1 | 1 |
| stress | 6 | 37 |
| survival | 31 | 213 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 383 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3820 of 4370 genes.