Gammaproteobacteria: Pseudomonas fluorescens FW300-N2C3
NCBI taxonomy id: 294
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| anaerobic | 1 | 1 |
| carbon source | 45 | 89 |
| lb | 1 | 4 |
| motility | 1 | 4 |
| nitrogen source | 19 | 19 |
| pH | 3 | 7 |
| phage | 1 | 1 |
| resistance | 4 | 7 |
| stress | 37 | 53 |
| survival | 1 | 5 |
| temperature | 1 | 8 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
762 genes with specific phenotypes, and 418 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| anaerobic | 1 | 15 |
| carbon source | 42 | 362 |
| motility | 1 | 24 |
| nitrogen source | 17 | 163 |
| pH | 1 | 17 |
| phage | 1 | 12 |
| resistance | 4 | 31 |
| stress | 34 | 282 |
| survival | 1 | 36 |
Updated Annotations
Updated annotations for 122 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 804 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 5193 of 6082 genes.