Updated annotations for Dechlorosoma suillum PS

5 genes with updated (or confirmed) annotations:

Dsui_0512 : Methylmalonyl-CoA epimerase (EC 5.1.99.1)
Original description: hypothetical protein
SEED: Methylmalonyl-CoA epimerase (EC 5.1.99.1)
KEGG: lactoylglutathione lyase
Rationale: Important on proprionate; this makes sense because of the utilization of the (S)-methylmalonyl-CoA formed by propionyl-CoA carboxylase (SEED_correct)

Dsui_0516 : Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)
Original description: acetyl-CoA carboxylase, biotin carboxylase subunit
SEED: Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)
KEGG: propionyl-CoA carboxylase alpha chain
Rationale: Specifically important for utilizing Sodium propionate. Automated validation from mutant phenotype: the predicted function (PROPIONYL-COA-CARBOXY-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.

Dsui_0517 : Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
Original description: acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
SEED: Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
KEGG: propionyl-CoA carboxylase beta chain
Rationale: Specifically important for utilizing Sodium propionate. Automated validation from mutant phenotype: the predicted function (PROPIONYL-COA-CARBOXY-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.

Dsui_0518 : methylmalonyl-CoA-mutase-associated GTPase MeaB
Original description: LAO/AO transport system ATPase
SEED: putative periplasmic protein kinase ArgK and related GTPases of G3E family
KEGG: LAO/AO transport system kinase
Rationale: Strongly cofit with methylmalonyl-CoA mutase (Dsui_0519). MeaB is required for the mutase's activity and is involved in loading vitamin B12 (see PMC4631608).

Dsui_0519 : Methylmalonyl-CoA mutase (EC 5.4.99.2)
Original description: methylmalonyl-CoA mutase
SEED: Methylmalonyl-CoA mutase (EC 5.4.99.2)
KEGG: methylmalonyl-CoA mutase
Rationale: Specifically important for utilizing Sodium propionate. Automated validation from mutant phenotype: the predicted function (METHYLMALONYL-COA-MUT-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.

Or download reannotations for Dechlorosoma suillum PS or for all organisms as tab-delimited tables