Betaproteobacteria: Dechlorosoma suillum PS
NCBI taxonomy id: 640081
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| unrecorded | 2 | 14 |
| alp rich | 1 | 3 |
| alp richb | 1 | 1 |
| anaerobic | 9 | 27 |
| carbon source | 8 | 24 |
| stress | 16 | 35 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
139 genes with specific phenotypes, and 20 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| 1 | 2 | |
| anaerobic | 4 | 24 |
| carbon source | 3 | 12 |
| stress | 13 | 108 |
Updated Annotations
Updated annotations for 5 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 278 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 2561 of 3504 genes.