Gammaproteobacteria: Vibrio cholerae E7946 ATCC 55056
NCBI taxonomy id: 666
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| lb_0.5%bileacids_aerobic | 1 | 6 |
| lb_0.5%bileacids_anaerobic | 1 | 7 |
| lb_aerobic | 1 | 6 |
| lb_aerobic_phage | 1 | 1 |
| lb_anaerobic | 1 | 7 |
| phage | 3 | 18 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
16 genes with specific phenotypes, and 0 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| lb_0.5%bileacids_aerobic | 1 | 9 |
| lb_0.5%bileacids_anaerobic | 1 | 5 |
| lb_aerobic | 1 | 2 |
| lb_anaerobic | 1 | 8 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 122 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3094 of 3924 genes.