Bacteroidetes: Parabacteroides merdae CL09T00C40
NCBI taxonomy id: 999421
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 19 | 36 |
| carbon source complex media | 10 | 20 |
| mouse | 2 | 19 |
| mouse mixed community | 1 | 3 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
122 genes with specific phenotypes, and 5 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 9 | 45 |
| carbon source complex media | 2 | 14 |
| mouse | 2 | 24 |
| mouse mixed community | 1 | 44 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 260 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3039 of 3637 genes.