Alphaproteobacteria: Phaeobacter inhibens DSM 17395
NCBI taxonomy id: 391619
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| unrecorded | 1 | 2 |
| carbon source | 50 | 105 |
| marine broth | 1 | 15 |
| nitrogen source | 15 | 30 |
| nutrient | 3 | 6 |
| pH | 1 | 5 |
| stress | 45 | 111 |
| temperature | 1 | 6 |
| vitamin | 1 | 2 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
568 genes with specific phenotypes, and 142 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| 1 | 1 | |
| carbon source | 31 | 245 |
| marine broth | 1 | 25 |
| nitrogen source | 14 | 118 |
| nutrient | 3 | 42 |
| pH | 1 | 6 |
| stress | 38 | 243 |
| temperature | 1 | 5 |
| vitamin | 1 | 113 |
Updated Annotations
Updated annotations for 78 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 311 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3099 of 3944 genes.