Gammaproteobacteria: Lysobacter sp. OAE881
NCBI taxonomy id: 68
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| agar plate interaction | 2 | 12 |
| agar plate interaction control | 2 | 12 |
| carbon source | 24 | 63 |
| dmso control | 1 | 4 |
| r2a no stress control | 1 | 4 |
| stress | 4 | 48 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
84 genes with specific phenotypes, and 7 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| agar plate interaction | 1 | 1 |
| carbon source | 12 | 74 |
| r2a no stress control | 1 | 1 |
| stress | 1 | 11 |
Updated Annotations
Updated annotations for 1 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 287 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3084 of 3853 genes.