Bacteroidetes: Pedobacter sp. GW460-11-11-14-LB5
NCBI taxonomy id: 84566
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 19 | 43 |
| nitrogen source | 23 | 43 |
| r2a | 1 | 9 |
| stress | 29 | 90 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
415 genes with specific phenotypes, and 73 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 19 | 81 |
| nitrogen source | 16 | 87 |
| stress | 24 | 298 |
Updated Annotations
Updated annotations for 57 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 253 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 4423 of 5089 genes.