Gammaproteobacteria: Marinobacter adhaerens HP15
NCBI taxonomy id: 225937
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 30 | 54 |
| marine broth | 1 | 14 |
| mixed community | 3 | 6 |
| nitrogen source | 22 | 36 |
| nutrient | 3 | 5 |
| pH | 1 | 8 |
| pro99_seawater | 2 | 21 |
| stress | 44 | 133 |
| temperature | 1 | 4 |
| vitamin | 1 | 1 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
493 genes with specific phenotypes, and 100 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 16 | 55 |
| mixed community | 3 | 21 |
| nitrogen source | 11 | 40 |
| nutrient | 3 | 7 |
| pH | 1 | 2 |
| pro99_seawater | 2 | 74 |
| stress | 35 | 353 |
| temperature | 1 | 10 |
| vitamin | 1 | 8 |
Updated Annotations
Updated annotations for 36 genesScaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 326 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3650 of 4470 genes.