Homologs of Rv3674c from Mycobacterium tuberculosis H37Rv

Probable endonuclease III Nth (DNA-(apurinic or apyrimidinic site)lyase) (AP lyase) (AP endonuclease class I) (endodeoxyribonuclease (apurinic or apyrimidinic)) (deoxyribonuclease (apurinic or apyrimidinic))
SEED: Endonuclease III (EC 4.2.99.18)
KEGG: endonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv3674c Probable endonuclease III Nth (DNA-(apurinic or apyrimidinic site)lyase) (AP lyase) (AP endonuclease class I) (endodeoxyribonuclease (apurinic or apyrimidinic)) (deoxyribonuclease (apurinic or apyrimidinic)) insig. 100 100
o Bifidobacterium breve UCC2003 BBR_RS11790 endonuclease III cofit 53 87
o Synechococcus elongatus PCC 7942 Synpcc7942_0447 nth DNA-(apurinic or apyrimidinic site) lyase / endonuclease III sig. 53 85
o Fusobacterium nucleatum SB010 HUW76_00260 endonuclease III cofit 44 83
  Desulfovibrio vulgaris Miyazaki F DvMF_2937 endonuclease III (RefSeq) insig. 45 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU0990 nth endonuclease III, putative (TIGR) insig. 45 89
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16725 endonuclease III insig. 41 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14955 endonuclease III strong 43 83
  Sinorhizobium meliloti 1021 SMc02843 endonuclease III protein insig. 44 82
  Agrobacterium fabrum C58 Atu4457 endonuclease III insig. 43 84
  Rhizobium sp. OAE497 ABIE40_RS16960 endonuclease III insig. 41 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00605 endonuclease III strong 41 77
o Shewanella oneidensis MR-1 SO2514 nth endonuclease III (NCBI ptt file) insig. 39 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1263 endonuclease III sig. 41 74
o Shewanella sp. ANA-3 Shewana3_2174 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (RefSeq) insig. 38 85
o Shewanella amazonensis SB2B Sama_1836 endonuclease III (RefSeq) insig. 38 85
o Bacteroides stercoris CC31F HMPREF1181_RS05445 endonuclease III insig. 41 81
o Paraburkholderia graminis OAS925 ABIE53_001423 endonuclease-3 insig. 40 82
o Shewanella loihica PV-4 Shew_2072 endonuclease III (RefSeq) insig. 39 82
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08185 endonuclease III strong 42 80
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15245 endonuclease III insig. 39 85
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00293 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III insig. 40 82
o Enterobacter asburiae PDN3 EX28DRAFT_1629 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) insig. 38 85
o Bacteroides thetaiotaomicron VPI-5482 BT1671 endonuclease III (NCBI ptt file) insig. 39 83
o Enterobacter sp. TBS_079 MPMX20_02005 Endonuclease III insig. 37 85
  Rhodopseudomonas palustris CGA009 TX73_001780 endonuclease III insig. 40 87
o Phocaeicola dorei CL03T12C01 ABI39_RS11275 endonuclease III insig. 38 85
o Lysobacter sp. OAE881 ABIE51_RS07560 endonuclease III insig. 39 91
o Bacteroides ovatus ATCC 8483 BACOVA_04414 endonuclease III sig. 38 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) insig. 41 78
o Rhodospirillum rubrum S1H Rru_A0153 Endonuclease III/Nth (NCBI) insig. 41 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09755 endonuclease III insig. 39 75
o Burkholderia phytofirmans PsJN BPHYT_RS06080 endonuclease IV insig. 39 82
o Escherichia coli BL21 ECD_01603 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) no data 37 84
o Escherichia fergusonii Becca EFB2_02359 Endonuclease III insig. 37 84
o Escherichia coli ECOR27 NOLOHH_18045 nth endonuclease III no data 37 84
o Escherichia coli ECOR38 HEPCGN_05910 nth endonuclease III cofit 37 84
o Escherichia coli ECRC62 BNILDI_16835 nth endonuclease III cofit 37 84
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02093 Endonuclease III insig. 37 84
o Escherichia coli Nissle 1917 ECOLIN_RS09110 endonuclease III no data 37 84
o Escherichia coli BW25113 b1633 nth DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) insig. 37 84
o Herbaspirillum seropedicae SmR1 HSERO_RS08070 endonuclease IV insig. 39 81
o Paraburkholderia sabiae LMG 24235 QEN71_RS24560 endonuclease III insig. 39 81
o Acinetobacter radioresistens SK82 MPMX26_02306 Endonuclease III insig. 39 80
o Alteromonas macleodii MIT1002 MIT1002_01251 Endonuclease III insig. 34 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3641 Endonuclease III (EC 4.2.99.18) insig. 37 84
  Variovorax sp. SCN45 GFF418 Endonuclease III (EC 4.2.99.18) insig. 42 78
o Escherichia coli ECRC100 OKFHMN_27525 nth endonuclease III cofit 37 84
o Escherichia coli ECRC101 MCAODC_17885 nth endonuclease III insig. 37 84
o Escherichia coli ECRC102 NIAGMN_00540 nth endonuclease III insig. 37 84
o Escherichia coli ECRC98 JDDGAC_02115 nth endonuclease III cofit 37 84
o Escherichia coli ECRC99 KEDOAH_00580 nth endonuclease III no data 37 84
o Pantoea sp. MT58 IAI47_10475 endonuclease III insig. 38 82
  Castellaniella sp019104865 MT123 ABCV34_RS08465 endonuclease III insig. 39 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) insig. 40 86
o Pseudomonas fluorescens FW300-N2E3 AO353_04085 endonuclease III insig. 40 86
  Marinobacter adhaerens HP15 HP15_1285 endonuclease III strong 39 78
o Dechlorosoma suillum PS Dsui_2985 endonuclease III insig. 40 86
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) sig. 40 86
  Azospirillum brasilense Sp245 AZOBR_RS01565 endonuclease III cofit 40 79
o Rhodanobacter denitrificans MT42 LRK55_RS01640 endonuclease III insig. 40 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01850 endonuclease III sig. 40 83
  Azospirillum sp. SherDot2 MPMX19_02500 Endonuclease III insig. 41 79
o Magnetospirillum magneticum AMB-1 AMB_RS21105 endonuclease III cofit 40 82
o Vibrio cholerae E7946 ATCC 55056 CSW01_05145 endonuclease III insig. 36 84
  Pseudomonas sp. S08-1 OH686_03910 endonuclease III insig. 40 79
  Dinoroseobacter shibae DFL-12 Dshi_3023 endonuclease III (RefSeq) sig. 42 74
  Pseudomonas syringae pv. syringae B728a Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase insig. 39 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase insig. 39 79
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) strong 39 86
o Dickeya dadantii 3937 DDA3937_RS10545 endonuclease III insig. 35 85
o Dickeya dianthicola ME23 DZA65_RS11025 endonuclease III insig. 35 85
  Methanococcus maripaludis JJ MMJJ_RS02235 DUF123 domain-containing protein cofit 33 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4003 Endonuclease III (EC 4.2.99.18) insig. 41 78
  Bosea sp. OAE506 ABIE41_RS03410 endonuclease III insig. 40 78
o Pseudomonas simiae WCS417 PS417_05655 endonuclease III insig. 40 86
o Dickeya dianthicola 67-19 HGI48_RS10545 endonuclease III insig. 35 85
o Pseudomonas putida KT2440 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites sig. 38 86
o Pectobacterium carotovorum WPP14 HER17_RS10860 endonuclease III insig. 36 85
  Variovorax sp. OAS795 ABID97_RS17315 endonuclease III insig. 42 78
o Pseudomonas fluorescens SBW25 PFLU_RS05740 endonuclease III insig. 39 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05740 endonuclease III insig. 39 86
o Pseudomonas sp. RS175 PFR28_03349 Endonuclease III insig. 39 86
  Klebsiella michiganensis M5al BWI76_RS16385 endonuclease III no data 38 76
  Erwinia tracheiphila SCR3 LU632_RS11305 nth endonuclease III insig. 37 76
o Rahnella sp. WP5 EX31_RS06590 endonuclease III insig. 36 86
  Methanococcus maripaludis S2 MMP_RS02840 DUF123 domain-containing protein insig. 33 76
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15000 endonuclease III insig. 39 82
o Pseudomonas fluorescens FW300-N2C3 AO356_18345 endonuclease III insig. 38 86
  Acidovorax sp. GW101-3H11 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) insig. 40 78
  Caulobacter crescentus NA1000 CCNA_03847 endonuclease III insig. 37 76
  Caulobacter crescentus NA1000 Δfur CCNA_03847 endonuclease III cofit 37 76
o Serratia liquefaciens MT49 IAI46_11455 endonuclease III insig. 36 85
o Ralstonia solanacearum GMI1000 RS_RS04975 endonuclease III insig. 37 81
o Ralstonia sp. UNC404CL21Col ABZR87_RS09915 endonuclease III insig. 36 81
  Rhodanobacter sp. FW510-T8 OKGIIK_04675 nth endonuclease III insig. 41 76
o Pseudomonas stutzeri RCH2 Psest_3118 endonuclease III strong 39 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2546 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) insig. 40 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14195 endonuclease III insig. 38 74
  Ralstonia solanacearum UW163 UW163_RS11660 endonuclease III insig. 38 74