Homologs of Psyr_0183 from Pseudomonas syringae pv. syringae B728a

diaminopimelate epimerase
SEED: Diaminopimelate epimerase (EC 5.1.1.7)
KEGG: diaminopimelate epimerase

148 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_0183 diaminopimelate epimerase no data 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0183 diaminopimelate epimerase no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS29270 diaminopimelate epimerase sig. 91 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29270 diaminopimelate epimerase no data 91 100
o Pseudomonas simiae WCS417 PS417_27585 diaminopimelate epimerase sig. 90 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05655 Diaminopimelate epimerase cofit 89 100
o Pseudomonas orientalis W4I3 QF045_RS01950 diaminopimelate epimerase no data 90 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) insig. 91 100
o Pseudomonas protegens RBAN4 FABNJH_30330 dapF diaminopimelate epimerase sig. 90 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) strong 91 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12735 diaminopimelate epimerase sig. 90 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) sig. 90 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09040 diaminopimelate epimerase sig. 89 100
o Pseudomonas sp. DMC3 GFF368 Diaminopimelate epimerase no data 89 100
o Pseudomonas sp. RS175 PFR28_04376 Diaminopimelate epimerase no data 89 100
o Pseudomonas sp. SVBP6 COO64_RS01260 dapF diaminopimelate epimerase no data 88 100
o Pseudomonas stutzeri RCH2 Psest_3765 diaminopimelate epimerase no data 84 100
o Pseudomonas putida KT2440 PP_5228 diaminopimelate epimerase no data 85 100
o Pseudomonas sp. BP01 JOY50_RS22600 dapF diaminopimelate epimerase no data 85 100
o Pseudomonas sp. S08-1 OH686_13795 diaminopimelate epimerase no data 83 100
o Pseudomonas segetis P6 ACVTMO_RS22515 dapF diaminopimelate epimerase no data 83 100
o Pseudomonas aeruginosa MRSN321 DY961_RS12275 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 77 100
o Pseudomonas aeruginosa PA14 IKLFDK_27060 diaminopimelate epimerase no data 77 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS49850 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 77 100
o Marinobacter adhaerens HP15 HP15_248 diaminopimelate epimerase no data 61 100
o Dechlorosoma suillum PS Dsui_0649 diaminopimelate epimerase no data 59 100
o Erwinia amylovora T8 OLJFJH_06405 diaminopimelate epimerase no data 55 99
o Enterobacter sp. TBS_079 MPMX20_04467 Diaminopimelate epimerase strong 55 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_00640 diaminopimelate epimerase no data 56 99
o Enterobacter asburiae PDN3 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) strong 55 99
o Dickeya dianthicola ME23 DZA65_RS21100 diaminopimelate epimerase no data 55 99
o Dickeya dianthicola 67-19 HGI48_RS20055 diaminopimelate epimerase no data 55 99
o Rahnella sp. WP5 EX31_RS15155 diaminopimelate epimerase insig. 54 99
o Escherichia coli BL21 ECD_03685 diaminopimelate epimerase strong 54 99
o Escherichia fergusonii Becca EFB2_04828 Diaminopimelate epimerase no data 54 99
o Escherichia coli ECOR27 NOLOHH_06560 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECOR38 HEPCGN_13135 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC100 OKFHMN_14430 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC101 MCAODC_04935 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC102 NIAGMN_12185 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC62 BNILDI_04975 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC98 JDDGAC_18055 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli ECRC99 KEDOAH_13720 dapF diaminopimelate epimerase no data 54 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04241 Diaminopimelate epimerase no data 54 99
o Escherichia coli BW25113 b3809 dapF diaminopimelate epimerase (VIMSS) no data 54 99
o Herbaspirillum seropedicae SmR1 HSERO_RS21455 diaminopimelate epimerase no data 56 100
o Escherichia coli Nissle 1917 ECOLIN_RS21865 diaminopimelate epimerase no data 54 99
o Klebsiella pneumoniae MKP103 KDGMDA_09690 diaminopimelate epimerase strong 54 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS23125 dapF;go_function=diaminopimelate diaminopimelate epimerase strong 54 99
o Pectobacterium carotovorum WPP14 HER17_RS01340 diaminopimelate epimerase no data 53 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08790 dapF diaminopimelate epimerase no data 55 99
o Erwinia tracheiphila SCR3 LU632_RS24145 dapF diaminopimelate epimerase no data 55 99
o Pantoea sp. MT58 IAI47_18410 diaminopimelate epimerase strong 54 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS18670 dapF diaminopimelate epimerase cofit 54 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) no data 53 99
o Dickeya dadantii 3937 DDA3937_RS19900 diaminopimelate epimerase no data 54 99
o Serratia liquefaciens MT49 IAI46_00715 diaminopimelate epimerase no data 53 99
o Cupriavidus basilensis FW507-4G11 RR42_RS01250 diaminopimelate epimerase no data 54 100
o Shewanella sp. ANA-3 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) no data 54 100
o Shewanella oneidensis MR-1 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) no data 53 100
o Shewanella loihica PV-4 Shew_0323 dapF diaminopimelate epimerase (RefSeq) no data 54 99
o Methylophilus sp. DMC18 GFF1537 Diaminopimelate epimerase no data 55 100
o Alteromonas macleodii MIT1002 MIT1002_00159 Diaminopimelate epimerase no data 51 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10065 diaminopimelate epimerase no data 55 100
o Ralstonia solanacearum UW163 UW163_RS03515 diaminopimelate epimerase no data 55 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0246 diaminopimelate epimerase (EC 5.1.1.7) no data 51 100
o Ralstonia solanacearum PSI07 RPSI07_RS23305 diaminopimelate epimerase no data 54 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS05580 diaminopimelate epimerase sig. 53 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS00365 diaminopimelate epimerase no data 51 100
o Klebsiella michiganensis M5al BWI76_RS01200 diaminopimelate epimerase strong 54 99
o Burkholderia phytofirmans PsJN BPHYT_RS01665 diaminopimelate epimerase no data 51 100
o Paraburkholderia graminis OAS925 ABIE53_000428 diaminopimelate epimerase no data 51 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02200 diaminopimelate epimerase no data 50 100
o Shewanella amazonensis SB2B Sama_3249 dapF diaminopimelate epimerase (RefSeq) no data 55 100
o Acinetobacter baumannii LAC-4 RR41_RS04440 diaminopimelate epimerase no data 54 100
o Ralstonia solanacearum GMI1000 RS_RS00675 diaminopimelate epimerase no data 55 100
o Acinetobacter radioresistens SK82 MPMX26_02231 Diaminopimelate epimerase no data 53 100
o Variovorax sp. OAS795 ABID97_RS06135 diaminopimelate epimerase no data 51 100
o Variovorax sp. SCN45 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) no data 49 100
o Acidovorax sp. GW101-3H11 Ac3H11_1993 Diaminopimelate epimerase (EC 5.1.1.7) no data 51 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15015 diaminopimelate epimerase no data 47 99
o Castellaniella sp019104865 MT123 ABCV34_RS13465 diaminopimelate epimerase no data 52 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF545 Diaminopimelate epimerase (EC 5.1.1.7) no data 49 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02325 diaminopimelate epimerase no data 47 99
o Synechocystis sp000284455 PCC 6803 SGL_RS17890 diaminopimelate epimerase no data 45 100
o Rhodanobacter sp. FW510-T8 OKGIIK_15335 dapF diaminopimelate epimerase no data 46 99
o Methanococcus maripaludis JJ MMJJ_RS00375 diaminopimelate epimerase no data 42 99
o Methanococcus maripaludis S2 MMP_RS04760 diaminopimelate epimerase no data 41 99
o Rhodanobacter denitrificans MT42 LRK55_RS08310 diaminopimelate epimerase no data 47 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08545 diaminopimelate epimerase no data 47 99
o Bacteroides stercoris CC31F HMPREF1181_RS16035 diaminopimelate epimerase insig. 42 99
o Synechococcus elongatus PCC 7942 Synpcc7942_1927 dapF diaminopimelate epimerase no data 44 100
o Sphingobium sp. HT1-2 GFF316 Diaminopimelate epimerase (EC 5.1.1.7) no data 47 99
o Bacteroides ovatus ATCC 8483 BACOVA_03762 diaminopimelate epimerase strong 40 99
o Bacteroides thetaiotaomicron VPI-5482 BT0548 diaminopimelate epimerase (NCBI ptt file) cofit 40 99
o Azospirillum brasilense Sp245 AZOBR_RS14160 diaminopimelate epimerase no data 42 99
o Phocaeicola dorei CL03T12C01 ABI39_RS14295 diaminopimelate epimerase cofit 39 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01230 diaminopimelate epimerase insig. 41 99
o Azospirillum sp. SherDot2 MPMX19_00602 Diaminopimelate epimerase no data 40 99
o Magnetospirillum magneticum AMB-1 AMB_RS01095 diaminopimelate epimerase no data 43 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.845.1 Diaminopimelate epimerase (EC 5.1.1.7) no data 44 98
o Lysobacter sp. OAE881 ABIE51_RS03025 diaminopimelate epimerase no data 44 99
o Rhodospirillum rubrum S1H Rru_A1183 Diaminopimelate epimerase (NCBI) no data 43 97
o Phaeobacter inhibens DSM 17395 PGA1_c33950 diaminopimelate epimerase DapF no data 41 98
o Dinoroseobacter shibae DFL-12 Dshi_3228 Diaminopimelate epimerase (RefSeq) no data 39 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06915 diaminopimelate epimerase strong 42 99
o Xanthobacter sp. DMC5 GFF1769 Diaminopimelate epimerase no data 39 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13290 diaminopimelate epimerase no data 39 96
o Bosea sp. OAE506 ABIE41_RS11700 diaminopimelate epimerase no data 40 98
o Caulobacter crescentus NA1000 CCNA_03800 diaminopimelate epimerase no data 39 99
o Caulobacter crescentus NA1000 Δfur CCNA_03800 diaminopimelate epimerase no data 39 99
o Rhodopseudomonas palustris CGA009 TX73_001300 diaminopimelate epimerase no data 39 97
  Pseudomonas orientalis W4I3 QF045_RS17720 diaminopimelate epimerase cofit 37 100
  Pseudomonas fluorescens SBW25 PFLU_RS17335 diaminopimelate epimerase insig. 38 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17335 diaminopimelate epimerase sig. 38 99
  Pseudomonas simiae WCS417 PS417_15365 diaminopimelate epimerase insig. 37 99
  Pseudomonas fluorescens FW300-N2C3 AO356_20725 diaminopimelate epimerase insig. 35 99
  Pseudomonas protegens RBAN4 FABNJH_13265 dapF diaminopimelate epimerase insig. 35 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6030 Diaminopimelate epimerase (EC 5.1.1.7) insig. 34 99
  Pseudomonas sp. SVBP6 COO64_RS23360 dapF diaminopimelate epimerase insig. 35 99
  Rahnella sp. WP5 EX31_RS10160 diaminopimelate epimerase insig. 39 96
o Sinorhizobium meliloti 1021 SMc03856 diaminopimelate epimerase no data 36 99
  Pseudomonas putida KT2440 PP_3790 diaminopimelate epimerase strong 35 97
o Rhizobium sp. OAE497 ABIE40_RS18325 diaminopimelate epimerase no data 36 99
  Agrobacterium fabrum C58 Atu2695 diaminopimelate epimerase no data 35 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU1867 dapF diaminopimelate epimerase (TIGR) no data 32 98
  Desulfovibrio vulgaris Miyazaki F DvMF_0561 dapF diaminopimelate epimerase (RefSeq) no data 34 98
  Cellulophaga baltica 18 M666_RS17805 diaminopimelate epimerase no data 31 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19550 diaminopimelate epimerase no data 29 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1430 diaminopimelate epimerase no data 30 100
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21670 diaminopimelate epimerase no data 30 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23025 diaminopimelate epimerase no data 31 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2394 diaminopimelate epimerase (EC 5.1.1.7) no data 30 100
  Bifidobacterium breve UCC2003 BBR_RS13700 diaminopimelate epimerase strong 29 97
  Mycobacterium tuberculosis H37Rv Rv2726c Probable diaminopimelate epimerase DapF (DAP epimerase) no data 28 98
  Pseudomonas sp. DMC3 GFF1358 Diaminopimelate epimerase cofit 27 72
  Pseudomonas simiae WCS417 PS417_09775 DeoR faimly transcriptional regulator insig. 29 72
  Pseudomonas fluorescens SBW25 PFLU_RS10355 DeoR family transcriptional regulator insig. 27 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10355 DeoR family transcriptional regulator insig. 27 72
  Pseudomonas fluorescens FW300-N2E3 AO353_19750 diaminopimelate epimerase insig. 26 73
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_114 Diaminopimelate epimerase (EC 5.1.1.7) insig. 27 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2444 Diaminopimelate epimerase (EC 5.1.1.7) insig. 27 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_33 Diaminopimelate epimerase (EC 5.1.1.7) insig. 26 76
  Pseudomonas protegens RBAN4 FABNJH_20850 Diaminopimelate epimerase insig. 26 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02154 Diaminopimelate epimerase cofit 26 72
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10025 hypothetical protein insig. 24 68
  Pseudomonas fluorescens FW300-N2C3 AO356_21240 diaminopimelate epimerase insig. 25 74
  Pseudomonas sp. RS175 PFR28_02855 Diaminopimelate epimerase insig. 27 75