Homologs of Pf6N2E2_5626 from Pseudomonas fluorescens FW300-N2E2

Hypothetical YciO protein, TsaC/YrdC paralog
SEED: Hypothetical YciO protein, TsaC/YrdC paralog
KEGG: putative translation factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5626 Hypothetical YciO protein, TsaC/YrdC paralog sig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18500 hypothetical protein insig. 99 100
o Pseudomonas sp. RS175 PFR28_03318 putative protein YciO insig. 98 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18525 hypothetical protein insig. 94 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3552 Hypothetical YciO protein, TsaC/YrdC paralog insig. 92 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4404 Hypothetical YciO protein, TsaC/YrdC paralog insig. 92 100
o Pseudomonas fluorescens SBW25 PFLU_RS23910 threonylcarbamoyl-AMP synthase insig. 91 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23910 threonylcarbamoyl-AMP synthase sig. 91 100
o Pseudomonas simiae WCS417 PS417_22270 hypothetical protein sig. 91 100
o Pseudomonas sp. S08-1 OH686_20800 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family insig. 84 98
o Pseudomonas syringae pv. syringae B728a Psyr_3585 Sua5/YciO/YrdC/YwlC insig. 84 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3585 Sua5/YciO/YrdC/YwlC insig. 84 98
o Pseudomonas putida KT2440 PP_4499 putative maturation enzyme sig. 78 100
o Pseudomonas stutzeri RCH2 Psest_1888 Sua5/YciO/YrdC/YwlC family protein sig. 78 99
o Marinobacter adhaerens HP15 HP15_1188 Sua5/YciO/YrdC/YwlC family protein sig. 66 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_05965 threonylcarbamoyl-AMP synthase insig. 60 98
o Rahnella sp. WP5 EX31_RS09945 threonylcarbamoyl-AMP synthase insig. 58 99
o Escherichia coli BL21 ECD_01241 putative RNA binding protein insig. 59 99
o Escherichia fergusonii Becca EFB2_02660 putative protein YciO insig. 59 99
o Escherichia coli ECOR27 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli ECOR38 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase cofit 59 99
o Escherichia coli ECRC101 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli ECRC101 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase insig. 59 99
o Escherichia coli ECRC102 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli ECRC62 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase insig. 59 99
o Escherichia coli ECRC98 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli ECRC99 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02417 putative protein YciO insig. 59 99
o Escherichia coli Nissle 1917 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase no data 59 99
o Escherichia coli BW25113 b1267 yciO orf, hypothetical protein (VIMSS) no data 59 99
o Serratia liquefaciens MT49 IAI46_14010 threonylcarbamoyl-AMP synthase insig. 59 98
o Alteromonas macleodii MIT1002 MIT1002_01432 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN insig. 58 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog insig. 58 99
o Acinetobacter radioresistens SK82 MPMX26_02446 putative protein YciO insig. 57 96
o Ralstonia solanacearum GMI1000 RS_RS05680 threonylcarbamoyl-AMP synthase insig. 58 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS05920 L-threonylcarbamoyladenylate synthase insig. 58 100
o Dickeya dadantii 3937 DDA3937_RS10495 threonylcarbamoyl-AMP synthase insig. 58 99
o Dickeya dianthicola 67-19 HGI48_RS10495 threonylcarbamoyl-AMP synthase insig. 57 99
o Dickeya dianthicola ME23 DZA65_RS10975 threonylcarbamoyl-AMP synthase insig. 57 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS10525 L-threonylcarbamoyladenylate synthase insig. 57 97
o Klebsiella michiganensis M5al BWI76_RS11870 hypothetical protein sig. 58 99
o Shewanella amazonensis SB2B Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) strong 55 99
o Pectobacterium carotovorum WPP14 HER17_RS10905 threonylcarbamoyl-AMP synthase insig. 57 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14870 threonylcarbamoyl-AMP synthase insig. 57 97
o Ralstonia solanacearum UW163 UW163_RS12340 threonylcarbamoyl-AMP synthase no data 57 97
o Enterobacter asburiae PDN3 EX28DRAFT_0939 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family cofit 57 99
o Enterobacter sp. TBS_079 MPMX20_02508 putative protein YciO sig. 57 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00505 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family insig. 57 100
o Ralstonia solanacearum PSI07 RPSI07_RS18490 threonylcarbamoyl-AMP synthase no data 57 97
o Burkholderia phytofirmans PsJN BPHYT_RS12635 translation factor Sua5 sig. 58 98
o Paraburkholderia graminis OAS925 ABIE53_002753 tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) insig. 57 100
o Cupriavidus basilensis FW507-4G11 RR42_RS06230 hypothetical protein insig. 58 96
o Erwinia tracheiphila SCR3 LU632_RS12745 threonylcarbamoyl-AMP synthase insig. 56 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2305 translation factor SUA5 insig. 53 98
o Pantoea sp. MT58 IAI47_09200 threonylcarbamoyl-AMP synthase insig. 53 99
o Herbaspirillum seropedicae SmR1 HSERO_RS16410 translation factor Sua5 insig. 55 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF110 Hypothetical YciO protein, TsaC/YrdC paralog insig. 53 96
o Dechlorosoma suillum PS Dsui_2730 Sua5/YciO/YrdC/YwlC family protein sig. 48 98
o Shewanella oneidensis MR-1 SO3016 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) strong 54 99
o Shewanella loihica PV-4 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) insig. 54 98
o Shewanella sp. ANA-3 Shewana3_1522 translation factor SUA5 (RefSeq) insig. 54 99
o Variovorax sp. SCN45 GFF5789 YciO protein, TsaC/YrdC paralog insig. 50 96
o Variovorax sp. OAS795 ABID97_RS22605 L-threonylcarbamoyladenylate synthase cofit 50 96
o Acidovorax sp. GW101-3H11 Ac3H11_1753 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA insig. 51 96
o Castellaniella sp019104865 MT123 ABCV34_RS15815 L-threonylcarbamoyladenylate synthase insig. 50 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07615 L-threonylcarbamoyladenylate synthase insig. 44 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02115 threonylcarbamoyl-AMP synthase sig. 42 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05100 threonylcarbamoyl-AMP synthase insig. 43 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0371 Sua5/YciO/YrdC/YwlC family protein insig. 43 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS05180 L-threonylcarbamoyladenylate synthase insig. 41 95
o Synechococcus elongatus PCC 7942 Synpcc7942_2350 translation factor SUA5 strong 37 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14510 threonylcarbamoyl-AMP synthase insig. 37 94
o Phocaeicola dorei CL03T12C01 ABI39_RS10130 threonylcarbamoyl-AMP synthase insig. 37 94
o Bacteroides ovatus ATCC 8483 BACOVA_04938 Sua5/YciO/YrdC/YwlC family protein insig. 36 94
o Bacteroides thetaiotaomicron VPI-5482 BT4128 conserved hypothetical protein (NCBI ptt file) sig. 36 94
o Bacteroides stercoris CC31F HMPREF1181_RS06425 threonylcarbamoyl-AMP synthase insig. 39 94
  Marinobacter adhaerens HP15 HP15_3747 Sua5/YciO/YrdC/YwlC family protein sig. 31 82
  Shewanella loihica PV-4 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) no data 30 82
  Shewanella oneidensis MR-1 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) no data 28 90
o Methanococcus maripaludis S2 MMP_RS01035 threonylcarbamoyl-AMP synthase no data 26 94
  Lysobacter sp. OAE881 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein no data 31 85
  Shewanella sp. ANA-3 Shewana3_0040 translation factor SUA5 (RefSeq) no data 28 90
  Pseudomonas putida KT2440 PP_0070 Threonylcarbamoyl-AMP synthase no data 31 87
  Rhodanobacter sp. FW510-T8 OKGIIK_13760 Threonylcarbamoyl-AMP synthase no data 29 81
o Desulfovibrio vulgaris Hildenborough JW710 DVU1255 Sua5/YciO/YrdC/YwlC family protein (TIGR) cofit 31 88
  Shewanella amazonensis SB2B Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) insig. 31 80
  Rhodospirillum rubrum S1H Rru_A0444 Sua5/YciO/YrdC/YwlC (NCBI) no data 30 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein no data 30 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_647 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 30 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4753.1 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 27 82
  Rhodopseudomonas palustris CGA009 TX73_005535 L-threonylcarbamoyladenylate synthase no data 27 84
  Rhodanobacter denitrificans MT42 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein no data 29 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein no data 29 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 29 86
  Pseudomonas fluorescens FW300-N2C3 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 29 86
  Pseudomonas stutzeri RCH2 Psest_0026 Putative translation factor (SUA5) no data 28 84
  Magnetospirillum magneticum AMB-1 AMB_RS18790 threonylcarbamoyl-AMP synthase no data 27 84
  Pseudomonas sp. RS175 PFR28_04658 Threonylcarbamoyl-AMP synthase no data 29 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 29 86
  Pseudomonas fluorescens FW300-N2E3 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 29 86