Homologs of PP_5228 from Pseudomonas putida KT2440

diaminopimelate epimerase
SEED: Diaminopimelate epimerase (EC 5.1.1.7)
KEGG: diaminopimelate epimerase

146 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_5228 diaminopimelate epimerase no data 100 100
o Pseudomonas sp. BP01 JOY50_RS22600 dapF diaminopimelate epimerase no data 98 96
o Pseudomonas sp. SVBP6 COO64_RS01260 dapF diaminopimelate epimerase no data 88 96
o Pseudomonas sp. RS175 PFR28_04376 Diaminopimelate epimerase no data 87 96
o Pseudomonas fluorescens FW300-N2C3 AO356_12735 diaminopimelate epimerase sig. 87 96
o Pseudomonas fluorescens FW300-N2E3 AO353_09040 diaminopimelate epimerase sig. 86 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) sig. 86 96
o Pseudomonas sp. DMC3 GFF368 Diaminopimelate epimerase no data 85 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) strong 85 96
o Pseudomonas syringae pv. syringae B728a Psyr_0183 diaminopimelate epimerase no data 85 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0183 diaminopimelate epimerase no data 85 96
o Pseudomonas segetis P6 ACVTMO_RS22515 dapF diaminopimelate epimerase no data 84 96
o Pseudomonas simiae WCS417 PS417_27585 diaminopimelate epimerase sig. 84 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05655 Diaminopimelate epimerase cofit 84 96
o Pseudomonas stutzeri RCH2 Psest_3765 diaminopimelate epimerase no data 84 96
o Pseudomonas protegens RBAN4 FABNJH_30330 dapF diaminopimelate epimerase sig. 84 96
o Pseudomonas fluorescens SBW25 PFLU_RS29270 diaminopimelate epimerase sig. 84 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29270 diaminopimelate epimerase no data 84 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) insig. 84 96
o Pseudomonas orientalis W4I3 QF045_RS01950 diaminopimelate epimerase no data 84 96
o Pseudomonas sp. S08-1 OH686_13795 diaminopimelate epimerase no data 82 96
o Pseudomonas aeruginosa PA14 IKLFDK_27060 diaminopimelate epimerase no data 79 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS49850 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 79 96
o Pseudomonas aeruginosa MRSN321 DY961_RS12275 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 79 96
o Marinobacter adhaerens HP15 HP15_248 diaminopimelate epimerase no data 60 98
o Dechlorosoma suillum PS Dsui_0649 diaminopimelate epimerase no data 63 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_00640 diaminopimelate epimerase no data 59 95
o Herbaspirillum seropedicae SmR1 HSERO_RS21455 diaminopimelate epimerase no data 58 96
o Enterobacter sp. TBS_079 MPMX20_04467 Diaminopimelate epimerase strong 57 95
o Escherichia coli BL21 ECD_03685 diaminopimelate epimerase strong 58 95
o Escherichia fergusonii Becca EFB2_04828 Diaminopimelate epimerase no data 58 95
o Escherichia coli ECOR27 NOLOHH_06560 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECOR38 HEPCGN_13135 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC100 OKFHMN_14430 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC101 MCAODC_04935 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC102 NIAGMN_12185 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC62 BNILDI_04975 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC98 JDDGAC_18055 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli ECRC99 KEDOAH_13720 dapF diaminopimelate epimerase no data 58 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04241 Diaminopimelate epimerase no data 58 95
o Escherichia coli BW25113 b3809 dapF diaminopimelate epimerase (VIMSS) no data 58 95
o Enterobacter asburiae PDN3 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) strong 57 95
o Serratia liquefaciens MT49 IAI46_00715 diaminopimelate epimerase no data 57 95
o Erwinia amylovora T8 OLJFJH_06405 diaminopimelate epimerase no data 57 95
o Escherichia coli Nissle 1917 ECOLIN_RS21865 diaminopimelate epimerase no data 58 95
o Klebsiella pneumoniae MKP103 KDGMDA_09690 diaminopimelate epimerase strong 57 95
o Klebsiella pneumoniae MRSN742743 KFA93_RS23125 dapF;go_function=diaminopimelate diaminopimelate epimerase strong 57 95
o Pectobacterium carotovorum WPP14 HER17_RS01340 diaminopimelate epimerase no data 56 95
o Dickeya dianthicola ME23 DZA65_RS21100 diaminopimelate epimerase no data 58 95
o Dickeya dianthicola 67-19 HGI48_RS20055 diaminopimelate epimerase no data 58 95
o Rahnella sp. WP5 EX31_RS15155 diaminopimelate epimerase insig. 57 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) no data 57 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS18670 dapF diaminopimelate epimerase cofit 57 95
o Pantoea sp. MT58 IAI47_18410 diaminopimelate epimerase strong 57 95
o Methylophilus sp. DMC18 GFF1537 Diaminopimelate epimerase no data 59 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08790 dapF diaminopimelate epimerase no data 56 95
o Erwinia tracheiphila SCR3 LU632_RS24145 dapF diaminopimelate epimerase no data 56 95
o Dickeya dadantii 3937 DDA3937_RS19900 diaminopimelate epimerase no data 57 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10065 diaminopimelate epimerase no data 57 96
o Ralstonia solanacearum UW163 UW163_RS03515 diaminopimelate epimerase no data 57 96
o Cupriavidus basilensis FW507-4G11 RR42_RS01250 diaminopimelate epimerase no data 56 96
o Ralstonia solanacearum PSI07 RPSI07_RS23305 diaminopimelate epimerase no data 56 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05580 diaminopimelate epimerase sig. 56 96
o Alteromonas macleodii MIT1002 MIT1002_00159 Diaminopimelate epimerase no data 55 96
o Shewanella sp. ANA-3 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) no data 55 96
o Shewanella oneidensis MR-1 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) no data 55 96
o Klebsiella michiganensis M5al BWI76_RS01200 diaminopimelate epimerase strong 58 95
o Shewanella loihica PV-4 Shew_0323 dapF diaminopimelate epimerase (RefSeq) no data 55 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS00365 diaminopimelate epimerase no data 54 96
o Burkholderia phytofirmans PsJN BPHYT_RS01665 diaminopimelate epimerase no data 53 96
o Acinetobacter baumannii LAC-4 RR41_RS04440 diaminopimelate epimerase no data 59 96
o Paraburkholderia graminis OAS925 ABIE53_000428 diaminopimelate epimerase no data 52 96
o Ralstonia solanacearum GMI1000 RS_RS00675 diaminopimelate epimerase no data 58 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02200 diaminopimelate epimerase no data 52 96
o Shewanella amazonensis SB2B Sama_3249 dapF diaminopimelate epimerase (RefSeq) no data 56 96
o Kangiella aquimarina DSM 16071 B158DRAFT_0246 diaminopimelate epimerase (EC 5.1.1.7) no data 49 96
o Acinetobacter radioresistens SK82 MPMX26_02231 Diaminopimelate epimerase no data 55 96
o Variovorax sp. OAS795 ABID97_RS06135 diaminopimelate epimerase no data 54 96
o Acidovorax sp. GW101-3H11 Ac3H11_1993 Diaminopimelate epimerase (EC 5.1.1.7) no data 54 94
o Variovorax sp. SCN45 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) no data 52 96
o Castellaniella sp019104865 MT123 ABCV34_RS13465 diaminopimelate epimerase no data 53 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15015 diaminopimelate epimerase no data 49 95
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02325 diaminopimelate epimerase no data 50 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF545 Diaminopimelate epimerase (EC 5.1.1.7) no data 49 96
o Rhodanobacter sp. FW510-T8 OKGIIK_15335 dapF diaminopimelate epimerase no data 50 95
o Synechocystis sp000284455 PCC 6803 SGL_RS17890 diaminopimelate epimerase no data 46 96
o Methanococcus maripaludis S2 MMP_RS04760 diaminopimelate epimerase no data 42 95
o Methanococcus maripaludis JJ MMJJ_RS00375 diaminopimelate epimerase no data 42 95
o Bacteroides stercoris CC31F HMPREF1181_RS16035 diaminopimelate epimerase insig. 42 95
o Rhodanobacter denitrificans MT42 LRK55_RS08310 diaminopimelate epimerase no data 50 95
o Synechococcus elongatus PCC 7942 Synpcc7942_1927 dapF diaminopimelate epimerase no data 45 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08545 diaminopimelate epimerase no data 49 95
o Azospirillum brasilense Sp245 AZOBR_RS14160 diaminopimelate epimerase no data 44 95
o Sphingobium sp. HT1-2 GFF316 Diaminopimelate epimerase (EC 5.1.1.7) no data 45 95
o Azospirillum sp. SherDot2 MPMX19_00602 Diaminopimelate epimerase no data 42 95
o Bacteroides ovatus ATCC 8483 BACOVA_03762 diaminopimelate epimerase strong 42 95
o Bacteroides thetaiotaomicron VPI-5482 BT0548 diaminopimelate epimerase (NCBI ptt file) cofit 41 95
o Phocaeicola dorei CL03T12C01 ABI39_RS14295 diaminopimelate epimerase cofit 39 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.845.1 Diaminopimelate epimerase (EC 5.1.1.7) no data 46 94
o Lysobacter sp. OAE881 ABIE51_RS03025 diaminopimelate epimerase no data 45 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01230 diaminopimelate epimerase insig. 40 95
o Magnetospirillum magneticum AMB-1 AMB_RS01095 diaminopimelate epimerase no data 43 94
o Dinoroseobacter shibae DFL-12 Dshi_3228 Diaminopimelate epimerase (RefSeq) no data 39 98
o Rhodospirillum rubrum S1H Rru_A1183 Diaminopimelate epimerase (NCBI) no data 42 93
o Phaeobacter inhibens DSM 17395 PGA1_c33950 diaminopimelate epimerase DapF no data 39 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13290 diaminopimelate epimerase no data 41 91
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06915 diaminopimelate epimerase strong 42 95
o Bosea sp. OAE506 ABIE41_RS11700 diaminopimelate epimerase no data 41 94
o Xanthobacter sp. DMC5 GFF1769 Diaminopimelate epimerase no data 40 94
  Pseudomonas fluorescens SBW25 PFLU_RS17335 diaminopimelate epimerase insig. 38 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17335 diaminopimelate epimerase sig. 38 95
  Pseudomonas protegens RBAN4 FABNJH_13265 dapF diaminopimelate epimerase insig. 37 95
o Caulobacter crescentus NA1000 CCNA_03800 diaminopimelate epimerase no data 38 95
o Caulobacter crescentus NA1000 Δfur CCNA_03800 diaminopimelate epimerase no data 38 95
o Rhodopseudomonas palustris CGA009 TX73_001300 diaminopimelate epimerase no data 39 94
  Pseudomonas sp. SVBP6 COO64_RS23360 dapF diaminopimelate epimerase insig. 37 95
  Pseudomonas fluorescens FW300-N2C3 AO356_20725 diaminopimelate epimerase insig. 35 95
  Pseudomonas orientalis W4I3 QF045_RS17720 diaminopimelate epimerase cofit 36 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6030 Diaminopimelate epimerase (EC 5.1.1.7) insig. 35 95
  Pseudomonas simiae WCS417 PS417_15365 diaminopimelate epimerase insig. 35 95
  Rahnella sp. WP5 EX31_RS10160 diaminopimelate epimerase insig. 41 92
o Sinorhizobium meliloti 1021 SMc03856 diaminopimelate epimerase no data 36 95
o Rhizobium sp. OAE497 ABIE40_RS18325 diaminopimelate epimerase no data 37 95
  Pseudomonas putida KT2440 PP_3790 diaminopimelate epimerase strong 34 93
  Agrobacterium fabrum C58 Atu2695 diaminopimelate epimerase no data 36 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU1867 dapF diaminopimelate epimerase (TIGR) no data 35 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0561 dapF diaminopimelate epimerase (RefSeq) no data 34 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19550 diaminopimelate epimerase no data 30 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21670 diaminopimelate epimerase no data 30 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1430 diaminopimelate epimerase no data 29 96
  Cellulophaga baltica 18 M666_RS17805 diaminopimelate epimerase no data 30 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23025 diaminopimelate epimerase no data 28 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2394 diaminopimelate epimerase (EC 5.1.1.7) no data 29 97
  Bifidobacterium breve UCC2003 BBR_RS13700 diaminopimelate epimerase strong 29 93
  Mycobacterium tuberculosis H37Rv Rv2726c Probable diaminopimelate epimerase DapF (DAP epimerase) no data 28 94
  Pseudomonas simiae WCS417 PS417_09775 DeoR faimly transcriptional regulator insig. 30 72
  Pseudomonas sp. DMC3 GFF1358 Diaminopimelate epimerase cofit 28 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_33 Diaminopimelate epimerase (EC 5.1.1.7) insig. 28 73
  Pseudomonas fluorescens SBW25 PFLU_RS10355 DeoR family transcriptional regulator insig. 28 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10355 DeoR family transcriptional regulator insig. 28 72
  Pseudomonas fluorescens FW300-N2E3 AO353_19750 diaminopimelate epimerase insig. 28 71
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2444 Diaminopimelate epimerase (EC 5.1.1.7) insig. 28 72
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02154 Diaminopimelate epimerase cofit 26 72
  Pseudomonas protegens RBAN4 FABNJH_20850 Diaminopimelate epimerase insig. 26 76
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_114 Diaminopimelate epimerase (EC 5.1.1.7) insig. 27 67
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10025 hypothetical protein insig. 24 66