Homologs of PP_1197 from Pseudomonas putida KT2440

ribosomal protein S12 methylthiotransferase
SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KEGG: ribosomal protein S12 methylthiotransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1197 ribosomal protein S12 methylthiotransferase insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS01920 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 98 100
o Pseudomonas sp. SVBP6 COO64_RS20000 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 98 98
o Pseudomonas sp. RS175 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO insig. 88 100
o Pseudomonas fluorescens SBW25 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO insig. 89 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO sig. 89 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01347 Ribosomal protein S12 methylthiotransferase RimO cofit 89 100
o Pseudomonas sp. DMC3 GFF2126 Ribosomal protein S12 methylthiotransferase RimO insig. 88 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 88 100
o Pseudomonas simiae WCS417 PS417_05880 ribosomal protein S12 methylthiotransferase insig. 89 100
o Pseudomonas fluorescens FW300-N2E3 AO353_16875 ribosomal protein S12 methylthiotransferase RimO sig. 88 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 88 100
o Pseudomonas aeruginosa PA14 IKLFDK_04105 30S ribosomal protein S12 methylthiotransferase RimO insig. 89 99
o Pseudomonas segetis P6 MPMX49_01636 Ribosomal protein S12 methylthiotransferase RimO insig. 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_05600 ribosomal protein S12 methylthiotransferase RimO sig. 88 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase sig. 88 100
o Pseudomonas syringae pv. syringae B728a Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 87 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 87 99
o Pseudomonas sp. S08-1 OH686_18875 ribosomal protein S12 methylthiotransferase RimO cofit 87 100
o Pseudomonas stutzeri RCH2 Psest_2632 ribosomal protein S12 methylthiotransferase RimO sig. 84 99
o Castellaniella sp019104865 MT123 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO cofit 74 99
o Marinobacter adhaerens HP15 HP15_2459 MiaB-like tRNA modifying enzyme YliG insig. 72 99
o Escherichia coli BL21 ECD_00802 ribosomal protein S12 methylthiotransferase insig. 72 99
o Escherichia coli ECOR27 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli ECOR38 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli ECRC101 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli ECRC102 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 72 99
o Escherichia coli ECRC62 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli ECRC98 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO sig. 72 99
o Escherichia coli ECRC99 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO no data 72 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli BW25113 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) insig. 72 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 72 99
o Klebsiella pneumoniae MKP103 KDGMDA_17375 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Klebsiella michiganensis M5al BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO sig. 71 99
o Escherichia fergusonii Becca EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO insig. 72 99
o Escherichia coli Nissle 1917 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO no data 72 99
o Escherichia coli ECRC100 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 72 99
o Enterobacter asburiae PDN3 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO insig. 71 99
o Azospirillum sp. SherDot2 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO cofit 71 98
o Enterobacter sp. TBS_079 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO insig. 70 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20035 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 71 100
o Erwinia tracheiphila SCR3 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 100
o Azospirillum brasilense Sp245 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase insig. 70 99
o Dickeya dianthicola 67-19 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO insig. 72 98
o Pectobacterium carotovorum WPP14 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 98
o Dickeya dianthicola ME23 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 98
o Kangiella aquimarina DSM 16071 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) insig. 70 99
o Dickeya dadantii 3937 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO insig. 71 98
o Acinetobacter baumannii LAC-4 RR41_RS08040 30S ribosomal protein S12 methylthiotransferase RimO no data 69 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO insig. 69 98
o Rhodospirillum rubrum S1H Rru_A2811 hypothetical protein (NCBI) sig. 69 98
o Acinetobacter radioresistens SK82 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO strong 69 99
o Alteromonas macleodii MIT1002 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO cofit 70 98
o Bosea sp. OAE506 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO insig. 65 98
o Ralstonia solanacearum GMI1000 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Shewanella amazonensis SB2B Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) insig. 65 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Ralstonia solanacearum UW163 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Ralstonia solanacearum PSI07 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Magnetospirillum magneticum AMB-1 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO cofit 63 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO cofit 66 98
o Lysobacter sp. OAE881 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Rhodanobacter denitrificans MT42 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Dechlorosoma suillum PS Dsui_2540 ribosomal protein S12 methylthiotransferase RimO sig. 64 98
o Methylophilus sp. DMC18 GFF1218 Ribosomal protein S12 methylthiotransferase RimO insig. 64 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS08260 30S ribosomal protein S12 methylthiotransferase RimO insig. 66 98
o Rhodanobacter sp. FW510-T8 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 67 98
o Shewanella sp. ANA-3 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) sig. 64 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1940.1 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 64 100
o Rhodopseudomonas palustris CGA009 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO insig. 65 98
o Burkholderia phytofirmans PsJN BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO no data 62 100
o Shewanella oneidensis MR-1 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) sig. 63 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO insig. 65 99
o Cupriavidus basilensis FW507-4G11 RR42_RS07640 ribosomal protein S12 methylthiotransferase insig. 63 98
o Paraburkholderia graminis OAS925 ABIE53_002068 ribosomal protein S12 methylthiotransferase insig. 63 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO strong 62 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase insig. 63 98
o Xanthobacter sp. DMC5 GFF1050 Ribosomal protein S12 methylthiotransferase RimO insig. 63 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 60 100
o Variovorax sp. SCN45 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) insig. 60 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO cofit 62 99
o Dinoroseobacter shibae DFL-12 Dshi_2618 MiaB-like tRNA modifying enzyme YliG (RefSeq) insig. 62 99
o Herbaspirillum seropedicae SmR1 HSERO_RS15005 ribosomal protein S12 methylthiotransferase insig. 62 99
o Acidovorax sp. GW101-3H11 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 61 99
o Sphingobium sp. HT1-2 GFF2264 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) cofit 62 100
o Variovorax sp. OAS795 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO insig. 60 100
o Phaeobacter inhibens DSM 17395 PGA1_c24370 ribosomal protein S12 methylthiotransferase RimO insig. 61 98
o Cellulophaga baltica 18 M666_RS09445 30S ribosomal protein S12 methylthiotransferase RimO insig. 40 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO sig. 37 98
o Synechococcus elongatus PCC 7942 Synpcc7942_2512 hypothetical protein strong 38 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO insig. 36 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0564 ribosomal protein S12 methylthiotransferase RimO insig. 39 100
o Synechocystis sp000284455 PCC 6803 SGL_RS15315 30S ribosomal protein S12 methylthiotransferase RimO strong 37 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15685 30S ribosomal protein S12 methylthiotransferase RimO insig. 37 98
o Bacteroides ovatus ATCC 8483 BACOVA_00737 ribosomal protein S12 methylthiotransferase RimO insig. 38 98
o Bacteroides thetaiotaomicron VPI-5482 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) sig. 37 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01815 30S ribosomal protein S12 methylthiotransferase RimO insig. 38 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO sig. 35 97