Homologs of MMP_RS04955 from Methanococcus maripaludis S2

DNA topoisomerase I
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS04955 DNA topoisomerase I strong 100 100
o Methanococcus maripaludis JJ MMJJ_RS00180 DNA topoisomerase I strong 100 100
o Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 30 82
o Pseudomonas stutzeri RCH2 Psest_2651 DNA topoisomerase I, bacterial strong 30 82
o Pseudomonas sp. RS175 PFR28_01113 DNA topoisomerase 1 strong 30 82
o Pseudomonas segetis P6 ACVTMO_RS14820 topA type I DNA topoisomerase no data 29 82
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2287 DNA topoisomerase I (EC 5.99.1.2) no data 29 82
o Pseudomonas aeruginosa MRSN321 DY961_RS01910 topA;go_component=cytoplasm|0005737||IEA;go_function=DNA type I DNA topoisomerase no data 30 82
o Pseudomonas aeruginosa PA14 IKLFDK_15320 type I DNA topoisomerase no data 30 82
o Pseudomonas aeruginosa PUPa3 DQ20_RS33670 topA;go_component=cytoplasm|0005737||IEA;go_function=DNA type I DNA topoisomerase no data 30 82
o Pseudomonas syringae pv. syringae B728a Psyr_3287 DNA topoisomerase I strong 30 82
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3287 DNA topoisomerase I no data 30 82
o Pseudomonas putida KT2440 PP_2139 DNA topoisomerase I no data 29 82
o Pseudomonas fluorescens FW300-N2C3 AO356_02315 DNA topoisomerase I strong 30 82
  Pseudomonas sp. DMC3 GFF1274 DNA topoisomerase 1 no data 29 82
o Pseudomonas sp. BP01 JOY50_RS25050 topA type I DNA topoisomerase no data 29 82
o Pseudomonas fluorescens FW300-N2E3 AO353_00495 DNA topoisomerase I strong 29 82
o Pseudomonas orientalis W4I3 QF045_RS10230 type I DNA topoisomerase no data 29 82
o Pseudomonas simiae WCS417 PS417_07590 DNA topoisomerase I no data 29 82
o Vibrio cholerae E7946 ATCC 55056 CSW01_08695 DNA topoisomerase 1 no data 30 82
o Pseudomonas fluorescens SBW25 PFLU_RS07665 type I DNA topoisomerase strong 29 82
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07665 type I DNA topoisomerase strong 29 82
o Escherichia coli BL21 ECD_01250 DNA topoisomerase I, omega subunit strong 29 93
o Escherichia coli ECOR27 NOLOHH_20270 type I DNA topoisomerase no data 29 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02410 DNA topoisomerase 1 strong 29 93
o Escherichia coli BW25113 b1274 topA DNA topoisomerase I (NCBI) no data 29 93
o Pseudomonas sp. SVBP6 COO64_RS09410 topA type I DNA topoisomerase strong 29 82
o Escherichia fergusonii Becca EFB2_02653 DNA topoisomerase 1 strong 29 93
o Escherichia coli ECRC100 OKFHMN_02605 type I DNA topoisomerase no data 29 93
o Escherichia coli ECRC101 MCAODC_15660 type I DNA topoisomerase no data 29 93
o Escherichia coli ECRC102 NIAGMN_26775 type I DNA topoisomerase no data 29 93
o Escherichia coli ECRC98 JDDGAC_05150 type I DNA topoisomerase no data 29 93
o Escherichia coli ECRC99 KEDOAH_26160 type I DNA topoisomerase no data 29 93
o Escherichia coli Nissle 1917 ECOLIN_RS07675 type I DNA topoisomerase no data 29 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01650 DNA topoisomerase 1 no data 29 82
o Kangiella aquimarina DSM 16071 B158DRAFT_2227 DNA topoisomerase I, bacterial strong 29 83
  Dickeya dianthicola 67-19 HGI48_RS10535 type I DNA topoisomerase no data 29 83
o Escherichia coli ECRC62 BNILDI_18420 type I DNA topoisomerase insig. 29 93
o Escherichia coli ECOR38 HEPCGN_25595 type I DNA topoisomerase strong 29 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) strong 29 82
  Klebsiella pneumoniae MKP103 KDGMDA_19615 type I DNA topoisomerase strong 30 83
  Dickeya dianthicola ME23 DZA65_RS11015 type I DNA topoisomerase no data 29 83
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4038 DNA topoisomerase I (EC 5.99.1.2) strong 29 82
  Alteromonas macleodii MIT1002 MIT1002_01705 DNA topoisomerase 1 no data 30 83
o Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 25 87
o Dechlorosoma suillum PS Dsui_2608 topoisomerase IA cofit 28 92
  Dickeya dadantii 3937 DDA3937_RS10535 type I DNA topoisomerase no data 29 83
  Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 28 82
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2714 DNA topoisomerase I (EC 5.99.1.2) no data 28 92
o Rahnella sp. WP5 EX31_RS09895 type I DNA topoisomerase cofit 29 83
o Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 29 82
  Pantoea sp. MT58 IAI47_09235 type I DNA topoisomerase insig. 28 83
o Marinobacter adhaerens HP15 HP15_1514 DNA topoisomerase I no data 28 82
o Enterobacter asburiae PDN3 EX28DRAFT_0945 DNA topoisomerase I, bacterial no data 29 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06950 type I DNA topoisomerase no data 28 83
o Enterobacter sp. TBS_079 MPMX20_02502 DNA topoisomerase 1 no data 28 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23715 type I DNA topoisomerase no data 28 83
  Erwinia tracheiphila SCR3 LU632_RS12555 topA type I DNA topoisomerase no data 28 83
  Erwinia amylovora T8 OLJFJH_13525 type I DNA topoisomerase no data 28 83
  Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 29 82
o Klebsiella michiganensis M5al BWI76_RS11925 DNA topoisomerase I no data 28 92
  Pectobacterium carotovorum WPP14 HER17_RS10875 type I DNA topoisomerase no data 28 83
o Shewanella amazonensis SB2B Sama_1322 DNA topoisomerase I (RefSeq) no data 28 82
  Acinetobacter baumannii LAC-4 RR41_RS16785 type I DNA topoisomerase no data 29 82
o Serratia liquefaciens MT49 IAI46_13970 type I DNA topoisomerase strong 29 82
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02650 DNA topoisomerase III sig. 28 85
o Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 26 87
  Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 29 83
  Burkholderia phytofirmans PsJN BPHYT_RS01440 DNA topoisomerase III no data 29 79
  Bacteroides thetaiotaomicron VPI-5482 BT2644 DNA topoisomerase I (NCBI ptt file) insig. 28 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02244 DNA topoisomerase-3 no data 29 79
  Bacteroides stercoris CC31F HMPREF1181_RS11415 type IA DNA topoisomerase insig. 28 76
o Castellaniella sp019104865 MT123 ABCV34_RS12290 DNA topoisomerase III no data 27 84
  Paraburkholderia graminis OAS925 ABIE53_000384 DNA topoisomerase-3 no data 28 79
o Paraburkholderia sabiae LMG 24235 QEN71_RS00140 DNA topoisomerase III no data 27 89
  Dechlorosoma suillum PS Dsui_0821 DNA topoisomerase III no data 27 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2450 DNA topoisomerase I, bacterial no data 28 79
o Rhodospirillum rubrum S1H Rru_A3202 DNA topoisomerase (NCBI) strong 25 90
  Cupriavidus basilensis FW507-4G11 RR42_RS20490 DNA topoisomerase III no data 28 68
  Erwinia amylovora T8 OLJFJH_02895 DNA topoisomerase III insig. 27 75
  Azospirillum sp. SherDot2 MPMX19_01509 DNA topoisomerase 1 no data 26 80
  Bacteroides ovatus ATCC 8483 BACOVA_01501 DNA topoisomerase insig. 27 67
  Bacteroides thetaiotaomicron VPI-5482 BT0105 DNA topoisomerase I (Omega-protein) (NCBI ptt file) sig. 29 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4752.1 DNA topoisomerase I (EC 5.99.1.2) insig. 30 63
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09745 DNA topoisomerase III no data 29 68
  Ralstonia solanacearum UW163 UW163_RS03835 DNA topoisomerase III no data 29 68
  Herbaspirillum seropedicae SmR1 HSERO_RS23390 DNA topoisomerase III no data 27 79
  Ralstonia solanacearum PSI07 RPSI07_RS23620 DNA topoisomerase III no data 29 68
o Sphingobium sp. HT1-2 GFF115 DNA topoisomerase I (EC 5.99.1.2) no data 26 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13865 DNA topoisomerase I sig. 30 66
  Phocaeicola dorei CL03T12C01 ABI39_RS08715 type IA DNA topoisomerase insig. 28 77
  Azospirillum brasilense Sp245 AZOBR_RS15890 DNA topoisomerase I strong 28 76
  Lysobacter sp. OAE881 ABIE51_RS02220 DNA topoisomerase I strong 30 73
  Methylophilus sp. DMC18 GFF1540 DNA topoisomerase 1 no data 27 76
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 27 86
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 27 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09790 type IA DNA topoisomerase sig. 28 75
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08935 type IA DNA topoisomerase insig. 28 75
  Cupriavidus basilensis FW507-4G11 RR42_RS24470 hypothetical protein insig. 27 76
  Ralstonia sp. UNC404CL21Col ABZR87_RS04995 DNA topoisomerase III strong 28 79