Homologs of PGA1_c04950 from Phaeobacter inhibens DSM 17395

GTP-dependent nucleic acid-binding protein EngD
SEED: GTP-binding and nucleic acid-binding protein YchF

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c04950 GTP-dependent nucleic acid-binding protein EngD strong 100 100
o Dinoroseobacter shibae DFL-12 Dshi_0954 GTP-binding protein YchF (RefSeq) no data 83 100
o Rhodopseudomonas palustris CGA009 TX73_022570 redox-regulated ATPase YchF strong 70 100
o Magnetospirillum magneticum AMB-1 AMB_RS21985 redox-regulated ATPase YchF no data 68 100
o Sinorhizobium meliloti 1021 SMc02695 GTP-dependent nucleic acid-binding protein EngD strong 67 100
o Agrobacterium fabrum C58 Atu2233 GTP-binding protein no data 68 100
o Rhizobium sp. OAE497 ABIE40_RS13100 redox-regulated ATPase YchF no data 68 100
o Caulobacter crescentus NA1000 CCNA_00512 GTP-binding protein, probable translation factor strong 66 100
o Caulobacter crescentus NA1000 Δfur CCNA_00512 GTP-binding protein, probable translation factor cofit 66 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09035 redox-regulated ATPase YchF insig. 67 100
o Rhodospirillum rubrum S1H Rru_A3748 hypothetical protein (NCBI) strong 68 100
o Azospirillum brasilense Sp245 AZOBR_RS30645 GTP-binding protein YchF no data 64 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3227 GTP-binding protein YchF strong 65 100
o Bosea sp. OAE506 ABIE41_RS11295 redox-regulated ATPase YchF no data 67 99
o Azospirillum sp. SherDot2 MPMX19_01641 Ribosome-binding ATPase YchF no data 64 100
o Sphingobium sp. HT1-2 GFF48 GTP-binding and nucleic acid-binding protein YchF no data 65 100
o Xanthobacter sp. DMC5 GFF1678 Ribosome-binding ATPase YchF no data 67 99
o Pectobacterium carotovorum WPP14 HER17_RS10445 redox-regulated ATPase YchF insig. 60 100
o Serratia liquefaciens MT49 IAI46_10240 redox-regulated ATPase YchF no data 60 100
o Shewanella amazonensis SB2B Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) strong 59 100
o Pantoea sp. MT58 IAI47_11310 redox-regulated ATPase YchF strong 59 100
o Escherichia fergusonii Becca EFB2_02724 Ribosome-binding ATPase YchF strong 59 100
o Escherichia coli ECOR27 NOLOHH_20650 ychF redox-regulated ATPase YchF no data 59 100
o Escherichia coli ECOR38 HEPCGN_24875 ychF redox-regulated ATPase YchF insig. 59 100
o Escherichia coli ECRC100 OKFHMN_28410 ychF redox-regulated ATPase YchF no data 59 100
o Escherichia coli ECRC101 MCAODC_21850 ychF redox-regulated ATPase YchF strong 59 100
o Escherichia coli ECRC102 NIAGMN_27825 ychF redox-regulated ATPase YchF no data 59 100
o Escherichia coli ECRC98 JDDGAC_06165 ychF redox-regulated ATPase YchF insig. 59 100
o Escherichia coli ECRC99 KEDOAH_25405 ychF redox-regulated ATPase YchF no data 59 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02484 Ribosome-binding ATPase YchF insig. 59 100
o Escherichia coli Nissle 1917 ECOLIN_RS07280 redox-regulated ATPase YchF insig. 59 100
o Escherichia coli BW25113 b1203 ychF translation-associated GTPase (NCBI) no data 59 100
o Klebsiella pneumoniae MKP103 KDGMDA_24705 redox-regulated ATPase YchF strong 59 100
o Escherichia coli ECRC62 BNILDI_18805 ychF redox-regulated ATPase YchF cofit 59 100
o Marinobacter adhaerens HP15 HP15_704 translation-associated GTPase strong 59 100
o Acinetobacter baumannii LAC-4 RR41_RS11610 redox-regulated ATPase YchF no data 60 100
o Erwinia amylovora T8 OLJFJH_14950 redox-regulated ATPase YchF strong 59 100
o Klebsiella michiganensis M5al BWI76_RS17485 GTP-binding protein YchF no data 61 100
o Escherichia coli BL21 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated no data 59 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17295 redox-regulated ATPase YchF cofit 59 100
o Dickeya dianthicola 67-19 HGI48_RS10975 redox-regulated ATPase YchF sig. 58 100
o Dickeya dianthicola ME23 DZA65_RS11435 redox-regulated ATPase YchF sig. 58 100
o Alteromonas macleodii MIT1002 MIT1002_01504 Ribosome-binding ATPase YchF sig. 59 100
o Dickeya dadantii 3937 DDA3937_RS11035 redox-regulated ATPase YchF strong 59 100
o Pseudomonas sp. RS175 PFR28_03664 Ribosome-binding ATPase YchF sig. 61 100
o Acinetobacter radioresistens SK82 MPMX26_01861 Ribosome-binding ATPase YchF strong 60 100
o Cupriavidus basilensis FW507-4G11 RR42_RS18365 GTP-binding protein sig. 61 100
o Enterobacter asburiae PDN3 EX28DRAFT_0821 GTP-binding protein YchF no data 60 100
o Enterobacter sp. TBS_079 MPMX20_02645 Ribosome-binding ATPase YchF strong 60 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14155 redox-regulated ATPase YchF sig. 59 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS22010 redox-regulated ATPase YchF strong 61 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2784 GTP-binding and nucleic acid-binding protein YchF strong 58 100
o Shewanella sp. ANA-3 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) strong 58 100
o Pseudomonas stutzeri RCH2 Psest_1103 GTP-binding protein YchF sig. 61 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06345 redox-regulated ATPase YchF strong 57 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF strong 61 100
o Pseudomonas fluorescens FW300-N2C3 AO356_16450 GTP-binding protein strong 60 100
o Pseudomonas sp. DMC3 GFF4499 Ribosome-binding ATPase YchF cofit 60 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF sig. 60 100
o Pseudomonas fluorescens FW300-N2E3 AO353_14740 GTP-binding protein strong 60 100
o Acidovorax sp. GW101-3H11 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF no data 61 100
o Pseudomonas syringae pv. syringae B728a Psyr_0941 Conserved hypothetical protein 92 sig. 61 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0941 Conserved hypothetical protein 92 sig. 61 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_21765 ychF redox-regulated ATPase YchF no data 58 100
o Erwinia tracheiphila SCR3 LU632_RS13950 ychF redox-regulated ATPase YchF insig. 58 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07495 GTP-binding protein YchF sig. 58 100
o Pseudomonas aeruginosa MRSN321 DY961_RS29200 ychF;go_function=GTP redox-regulated ATPase YchF strong 60 100
o Pseudomonas aeruginosa PA14 IKLFDK_00125 Ribosome-binding ATPase YchF strong 60 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS55495 ychF;go_function=GTP redox-regulated ATPase YchF strong 60 100
o Shewanella oneidensis MR-1 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) strong 57 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11490 redox-regulated ATPase YchF strong 58 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4168.1 GTP-binding and nucleic acid-binding protein YchF sig. 59 100
o Rahnella sp. WP5 EX31_RS07380 redox-regulated ATPase YchF insig. 59 100
o Phocaeicola dorei CL03T12C01 ABI39_RS05450 redox-regulated ATPase YchF strong 58 100
o Pseudomonas orientalis W4I3 QF045_RS06540 redox-regulated ATPase YchF sig. 61 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00918 Ribosome-binding ATPase YchF cofit 60 100
o Pseudomonas fluorescens SBW25 PFLU_RS03610 redox-regulated ATPase YchF strong 60 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03610 redox-regulated ATPase YchF strong 60 100
o Burkholderia phytofirmans PsJN BPHYT_RS17445 GTP-binding protein YchF strong 59 100
o Shewanella loihica PV-4 Shew_2919 translation-associated GTPase (RefSeq) strong 57 100
o Cellulophaga baltica 18 M666_RS17330 redox-regulated ATPase YchF insig. 56 99
o Pseudomonas sp. S08-1 OH686_07965 GTP-binding and nucleic acid-binding protein YchF cofit 59 100
o Pseudomonas simiae WCS417 PS417_03560 GTP-binding protein strong 61 100
o Synechocystis sp000284455 PCC 6803 SGL_RS08975 redox-regulated ATPase YchF strong 59 99
o Paraburkholderia graminis OAS925 ABIE53_003650 GTP-binding protein YchF strong 58 100
o Pseudomonas putida KT2440 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase sig. 60 100
o Pseudomonas sp. BP01 JOY50_RS24895 ychF redox-regulated ATPase YchF insig. 60 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05705 hypothetical protein insig. 58 100
o Ralstonia solanacearum PSI07 RPSI07_RS10660 redox-regulated ATPase YchF sig. 59 100
o Pseudomonas sp. SVBP6 COO64_RS03185 ychF redox-regulated ATPase YchF sig. 59 100
o Kangiella aquimarina DSM 16071 B158DRAFT_2052 GTP-binding protein YchF strong 57 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06260 redox-regulated ATPase YchF no data 59 100
o Ralstonia solanacearum GMI1000 RS_RS14520 redox-regulated ATPase YchF sig. 58 100
o Rhodanobacter sp. FW510-T8 OKGIIK_10565 Ribosome-binding ATPase YchF sig. 59 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06570 redox-regulated ATPase YchF insig. 58 100
o Ralstonia solanacearum UW163 UW163_RS07055 redox-regulated ATPase YchF insig. 58 100
o Lysobacter sp. OAE881 ABIE51_RS05745 redox-regulated ATPase YchF insig. 57 100
o Variovorax sp. SCN45 GFF2141 GTP-binding and nucleic acid-binding protein YchF strong 57 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02220 redox-regulated ATPase YchF strong 58 100
o Bacteroides thetaiotaomicron VPI-5482 BT3116 GTP-binding protein (NCBI ptt file) no data 57 100