Homologs of GFF3870 from Variovorax sp. SCN45

Ribonuclease III (EC 3.1.26.3)
SEED: Ribonuclease III (EC 3.1.26.3)
KEGG: ribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3870 Ribonuclease III (EC 3.1.26.3) strong 100 100
o Variovorax sp. OAS795 ABID97_RS08365 ribonuclease III strong 92 100
o Acidovorax sp. GW101-3H11 Ac3H11_1566 Ribonuclease III (EC 3.1.26.3) no data 80 93
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3346 Ribonuclease III (EC 3.1.26.3) no data 74 96
  Herbaspirillum seropedicae SmR1 HSERO_RS09660 ribonuclease III strong 62 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS10205 ribonuclease III no data 61 93
o Dechlorosoma suillum PS Dsui_2460 ribonuclease III no data 60 96
o Ralstonia solanacearum PSI07 RPSI07_RS18975 ribonuclease III no data 61 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14485 ribonuclease III no data 61 93
o Ralstonia solanacearum UW163 UW163_RS11950 ribonuclease III no data 61 93
o Ralstonia solanacearum GMI1000 RS_RS05265 ribonuclease 3 no data 60 93
o Cupriavidus basilensis FW507-4G11 RR42_RS14040 ribonuclease III no data 62 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS04610 ribonuclease III insig. 59 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04362 RNAse III (EC 3.1.26.3) insig. 60 86
  Paraburkholderia graminis OAS925 ABIE53_003036 ribonuclease-3 sig. 60 86
  Burkholderia phytofirmans PsJN BPHYT_RS14370 ribonuclease III insig. 59 85
o Castellaniella sp019104865 MT123 ABCV34_RS08325 ribonuclease III no data 54 98
o Kangiella aquimarina DSM 16071 B158DRAFT_2187 ribonuclease III, bacterial sig. 51 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_12455 ribonuclease 3 no data 50 94
o Shewanella amazonensis SB2B Sama_0880 rnc ribonuclease III (RefSeq) no data 52 91
o Pseudomonas putida KT2440 PP_1433 Ribonuclease 3 no data 50 96
o Pseudomonas fluorescens SBW25 PFLU_RS05260 ribonuclease III no data 51 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05260 ribonuclease III no data 51 92
o Pseudomonas syringae pv. syringae B728a Psyr_3951 RNAse III no data 51 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3951 RNAse III no data 51 92
o Pseudomonas simiae WCS417 PS417_05190 ribonuclease III no data 51 92
o Shewanella loihica PV-4 Shew_1054 ribonuclease III (RefSeq) no data 50 93
o Alteromonas macleodii MIT1002 MIT1002_02713 Ribonuclease 3 no data 48 92
o Pseudomonas fluorescens FW300-N2E3 AO353_04510 ribonuclease III no data 50 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) no data 50 93
o Pantoea sp. MT58 IAI47_04880 ribonuclease III no data 48 94
o Escherichia coli BL21 ECD_02461 RNase III no data 49 95
o Escherichia fergusonii Becca EFB2_01329 Ribonuclease 3 no data 49 95
o Escherichia coli ECOR27 NOLOHH_13085 rnc ribonuclease III no data 49 95
o Escherichia coli ECOR38 HEPCGN_20555 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC101 OKFHMN_21410 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC101 MCAODC_11940 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC102 NIAGMN_19180 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC62 BNILDI_11885 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC98 JDDGAC_25075 rnc ribonuclease III no data 49 95
o Escherichia coli ECRC99 KEDOAH_06810 rnc ribonuclease III no data 49 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01140 Ribonuclease 3 no data 49 95
o Escherichia coli Nissle 1917 ECOLIN_RS14530 ribonuclease III no data 49 95
o Escherichia coli BW25113 b2567 rnc ribonuclease III (NCBI) strong 49 95
o Pseudomonas fluorescens FW300-N2C3 AO356_17495 ribonuclease III no data 50 93
o Marinobacter adhaerens HP15 HP15_784 ribonuclease 3 insig. 45 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2475 Ribonuclease III (EC 3.1.26.3) strong 49 95
o Shewanella oneidensis MR-1 SO1348 rnc ribonuclease III (NCBI ptt file) no data 49 93
o Enterobacter asburiae PDN3 EX28DRAFT_0079 ribonuclease III, bacterial no data 49 88
o Enterobacter sp. TBS_079 MPMX20_03438 Ribonuclease 3 no data 49 88
o Shewanella sp. ANA-3 Shewana3_3026 rnc ribonuclease III (RefSeq) no data 49 93
o Klebsiella michiganensis M5al BWI76_RS21320 ribonuclease 3 no data 48 95
o Pseudomonas stutzeri RCH2 Psest_3092 ribonuclease III, bacterial strong 49 92
o Erwinia tracheiphila SCR3 LU632_RS15385 rnc ribonuclease III insig. 47 94
o Dickeya dadantii 3937 DDA3937_RS15735 ribonuclease III no data 47 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07150 ribonuclease III no data 48 94
o Pectobacterium carotovorum WPP14 HER17_RS05815 ribonuclease III no data 47 95
o Dickeya dianthicola ME23 DZA65_RS16900 ribonuclease III no data 47 95
o Dickeya dianthicola 67-19 HGI48_RS15820 ribonuclease III no data 47 95
o Rhodanobacter sp. FW510-T8 OKGIIK_07870 rnc ribonuclease III cofit 49 93
o Pseudomonas sp. RS175 PFR28_03523 Ribonuclease 3 no data 51 83
o Rahnella sp. WP5 EX31_RS21835 ribonuclease III no data 49 95
o Lysobacter sp. OAE881 ABIE51_RS13860 ribonuclease III no data 49 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4840 Ribonuclease III (EC 3.1.26.3) no data 51 83
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_892 Ribonuclease III (EC 3.1.26.3) no data 51 83
o Acinetobacter radioresistens SK82 MPMX26_02156 Ribonuclease 3 no data 48 93
o Pseudomonas sp. S08-1 OH686_20080 ribonuclease III no data 51 83
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3673.1 Ribonuclease III (EC 3.1.26.3) no data 45 93
o Serratia liquefaciens MT49 IAI46_19550 ribonuclease III no data 48 88
o Rhodanobacter denitrificans MT42 LRK55_RS16685 ribonuclease III strong 47 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16970 ribonuclease III strong 47 92
o Rhodospirillum rubrum S1H Rru_A1852 Ribonuclease III (NCBI) no data 45 96
o Magnetospirillum magneticum AMB-1 AMB_RS11425 ribonuclease III cofit 42 98
o Bosea sp. OAE506 ABIE41_RS19930 ribonuclease III no data 41 94
o Rhodopseudomonas palustris CGA009 TX73_013975 ribonuclease III insig. 43 94
o Desulfovibrio vulgaris Hildenborough JW710 DVU1440 rnc ribonuclease III (TIGR) no data 42 92
o Desulfovibrio vulgaris Miyazaki F DvMF_0243 rnc ribonuclease III (RefSeq) no data 41 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05535 ribonuclease III no data 40 96
o Phaeobacter inhibens DSM 17395 PGA1_c01060 ribonuclease 3 sig. 41 95
o Rhizobium sp. OAE497 ABIE40_RS06075 ribonuclease III no data 39 94
o Fusobacterium nucleatum SB010 HUW76_02250 ribonuclease III no data 33 96
o Azospirillum brasilense Sp245 AZOBR_RS22070 ribonuclease III no data 37 96
o Methanococcus maripaludis JJ MMJJ_RS06515 ribonuclease III insig. 34 94
o Methanococcus maripaludis S2 MMP_RS07840 ribonuclease III sig. 33 94
o Dinoroseobacter shibae DFL-12 Dshi_0200 Ribonuclease III (RefSeq) no data 40 89
o Agrobacterium fabrum C58 Atu1035 ribonuclease III no data 36 94
o Azospirillum sp. SherDot2 MPMX19_00843 Ribonuclease 3 no data 37 94
o Caulobacter crescentus NA1000 CCNA_01630 ribonuclease III no data 40 82
o Caulobacter crescentus NA1000 Δfur CCNA_01630 ribonuclease III no data 40 82
o Bifidobacterium breve UCC2003 BBR_RS12355 ribonuclease III strong 38 89
o Sinorhizobium meliloti 1021 SMc02652 ribonuclease III no data 37 94
o Mycobacterium tuberculosis H37Rv Rv2925c Probable ribonuclease III Rnc (RNase III) no data 41 74
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1946 ribonuclease III, bacterial no data 37 82
  Phocaeicola dorei CL03T12C01 ABI39_RS06330 ribonuclease III cofit 32 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10765 ribonuclease III strong 32 90
  Bacteroides stercoris CC31F HMPREF1181_RS02420 ribonuclease III cofit 30 91
  Bacteroides ovatus ATCC 8483 BACOVA_01957 ribonuclease III insig. 31 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00745 ribonuclease III sig. 31 95
  Bacteroides thetaiotaomicron VPI-5482 BT3357 ribonuclease III (NCBI ptt file) strong 32 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07075 ribonuclease III insig. 29 89