Homologs of GFF3465 from Sphingobium sp. HT1-2

Excinuclease ABC subunit C
SEED: Excinuclease ABC subunit C
KEGG: excinuclease ABC subunit C

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3465 Excinuclease ABC subunit C cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3186 Excinuclease ABC subunit C strong 74 97
o Rhodospirillum rubrum S1H Rru_A2220 Excinuclease ABC, C subunit (NCBI) insig. 58 95
o Azospirillum brasilense Sp245 AZOBR_RS08965 excinuclease ABC subunit C insig. 58 92
o Azospirillum sp. SherDot2 MPMX19_01070 UvrABC system protein C insig. 57 92
o Phaeobacter inhibens DSM 17395 PGA1_c02880 uvrABC system protein C strong 55 93
o Magnetospirillum magneticum AMB-1 AMB_RS19240 UvrABC system protein C cofit 56 92
o Dinoroseobacter shibae DFL-12 Dshi_0644 excinuclease ABC, C subunit (RefSeq) strong 54 93
o Sinorhizobium meliloti 1021 SMc00602 excinuclease ABC subunit C strong 56 92
o Agrobacterium fabrum C58 Atu1129 excinuclease ABC chain C strong 55 92
o Rhodopseudomonas palustris CGA009 TX73_006010 excinuclease ABC subunit UvrC strong 51 95
o Rhizobium sp. OAE497 ABIE40_RS06500 excinuclease ABC subunit UvrC no data 54 92
  Azospirillum brasilense Sp245 AZOBR_RS18630 excinuclease ABC subunit C insig. 54 92
  Azospirillum sp. SherDot2 MPMX19_05963 UvrABC system protein C insig. 51 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01670 excinuclease ABC subunit UvrC insig. 50 90
o Caulobacter crescentus NA1000 CCNA_02975 excinuclease ABC subunit C strong 50 92
o Caulobacter crescentus NA1000 Δfur CCNA_02975 excinuclease ABC subunit C cofit 50 92
  Xanthobacter sp. DMC5 GFF1733 UvrABC system protein C insig. 54 70
o Lysobacter sp. OAE881 ABIE51_RS12455 excinuclease ABC subunit UvrC cofit 44 91
o Pseudomonas aeruginosa MRSN321 DY961_RS04665 uvrC;go_component=excinuclease excinuclease ABC subunit UvrC cofit 42 91
o Pseudomonas aeruginosa PA14 IKLFDK_12970 excinuclease ABC subunit UvrC strong 42 91
o Pseudomonas aeruginosa PUPa3 DQ20_RS35325 uvrC;go_component=excinuclease excinuclease ABC subunit UvrC sig. 42 91
o Methylophilus sp. DMC18 GFF496 UvrABC system protein C insig. 42 91
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02233 UvrABC system protein C cofit 42 91
o Pseudomonas stutzeri RCH2 Psest_2259 excinuclease ABC, C subunit strong 42 90
o Pseudomonas fluorescens SBW25 PFLU_RS10770 excinuclease ABC subunit UvrC insig. 42 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10770 excinuclease ABC subunit UvrC insig. 42 91
o Dechlorosoma suillum PS Dsui_2470 excinuclease ABC, C subunit strong 44 91
o Pseudomonas simiae WCS417 PS417_10725 excinuclease ABC subunit C strong 42 91
o Pseudomonas sp. BP01 JOY50_RS06865 uvrC excinuclease ABC subunit UvrC insig. 42 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00380 excinuclease ABC subunit UvrC insig. 42 91
o Pseudomonas orientalis W4I3 QF045_RS12805 excinuclease ABC subunit UvrC insig. 42 91
o Pseudomonas segetis P6 ACVTMO_RS12515 uvrC excinuclease ABC subunit UvrC insig. 41 91
o Rhodanobacter denitrificans MT42 LRK55_RS00120 excinuclease ABC subunit UvrC strong 42 91
o Pseudomonas putida KT2440 PP_4098 UvrABC system protein C strong 42 91
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09770 excinuclease ABC subunit UvrC insig. 42 91
o Pseudomonas fluorescens FW300-N2E3 AO353_21835 excinuclease ABC subunit C strong 41 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2886 Excinuclease ABC subunit C sig. 41 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2477.1 Excinuclease ABC subunit C sig. 44 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5618 Excinuclease ABC subunit C insig. 42 91
o Pseudomonas sp. S08-1 OH686_00340 excinuclease ABC subunit C insig. 42 89
o Pseudomonas fluorescens FW300-N2C3 AO356_00350 excinuclease ABC subunit C strong 42 91
o Pseudomonas sp. SVBP6 COO64_RS13930 uvrC excinuclease ABC subunit UvrC insig. 41 91
o Rhodanobacter sp. FW510-T8 OKGIIK_06930 uvrC excinuclease ABC subunit UvrC insig. 42 91
o Pseudomonas sp. DMC3 GFF3645 UvrABC system protein C cofit 41 91
o Pseudomonas syringae pv. syringae B728a Psyr_2896 Excinuclease ABC subunit C strong 41 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2896 Excinuclease ABC subunit C strong 41 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02245 excinuclease ABC subunit UvrC strong 42 91
o Marinobacter adhaerens HP15 HP15_1568 excinuclease ABC subunit C strong 40 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2021 Excinuclease ABC subunit C strong 41 89
o Pseudomonas sp. RS175 PFR28_01411 UvrABC system protein C insig. 41 89
o Castellaniella sp019104865 MT123 ABCV34_RS06980 excinuclease ABC subunit UvrC insig. 40 91
o Vibrio cholerae E7946 ATCC 55056 CSW01_06140 excinuclease ABC subunit C cofit 38 90
o Shewanella amazonensis SB2B Sama_1608 uvrC excinuclease ABC subunit C (RefSeq) strong 39 91
o Escherichia coli ECOR27 NOLOHH_16445 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Alteromonas macleodii MIT1002 MIT1002_02153 Excinuclease ABC subunit C insig. 40 91
o Herbaspirillum seropedicae SmR1 HSERO_RS09690 excinuclease ABC subunit C strong 39 92
o Escherichia fergusonii Becca EFB2_02033 UvrABC system protein C insig. 38 90
o Escherichia coli ECOR38 HEPCGN_04180 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC100 OKFHMN_25825 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC101 MCAODC_19565 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC102 NIAGMN_02225 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC62 BNILDI_15235 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC98 JDDGAC_00415 uvrC excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli ECRC99 KEDOAH_02265 uvrC excinuclease ABC subunit UvrC no data 38 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01816 UvrABC system protein C sig. 38 90
o Escherichia coli Nissle 1917 ECOLIN_RS10895 excinuclease ABC subunit UvrC insig. 38 90
o Escherichia coli BW25113 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) strong 38 90
o Escherichia coli BL21 ECD_01878 excinuclease UvrABC, endonuclease subunit cofit 38 90
o Pantoea sp. MT58 IAI47_12465 excinuclease ABC subunit UvrC insig. 39 90
o Acinetobacter radioresistens SK82 MPMX26_00228 UvrABC system protein C sig. 41 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04865 excinuclease ABC subunit UvrC cofit 39 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1700 Excinuclease ABC subunit C insig. 38 90
o Acinetobacter baumannii LAC-4 RR41_RS17435 excinuclease ABC subunit UvrC insig. 40 91
o Variovorax sp. OAS795 ABID97_RS10635 excinuclease ABC subunit UvrC strong 39 92
o Klebsiella michiganensis M5al BWI76_RS18330 excinuclease ABC subunit C strong 38 90
o Klebsiella pneumoniae MKP103 KDGMDA_25595 excinuclease ABC subunit UvrC insig. 38 90
o Kangiella aquimarina DSM 16071 B158DRAFT_1273 Excinuclease ABC subunit C strong 37 91
o Dickeya dadantii 3937 DDA3937_RS13700 excinuclease ABC subunit UvrC insig. 37 90
o Rahnella sp. WP5 EX31_RS24150 excinuclease ABC subunit UvrC insig. 38 90
o Shewanella oneidensis MR-1 SO1861 uvrC excinuclease ABC, C subunit (NCBI ptt file) strong 38 91
o Variovorax sp. SCN45 GFF2859 Excinuclease ABC subunit C insig. 38 92
o Ralstonia solanacearum GMI1000 RS_RS05305 excinuclease ABC subunit UvrC strong 38 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS10245 excinuclease ABC subunit UvrC cofit 38 93
o Dickeya dianthicola 67-19 HGI48_RS13795 excinuclease ABC subunit UvrC insig. 37 90
o Enterobacter asburiae PDN3 EX28DRAFT_0634 Excinuclease ABC subunit C cofit 38 90
o Enterobacter sp. TBS_079 MPMX20_02838 UvrABC system protein C strong 38 90
o Dickeya dianthicola ME23 DZA65_RS14285 excinuclease ABC subunit UvrC insig. 37 90
o Serratia liquefaciens MT49 IAI46_09210 excinuclease ABC subunit UvrC cofit 37 90
o Erwinia tracheiphila SCR3 LU632_RS10195 uvrC excinuclease ABC subunit UvrC insig. 37 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14525 excinuclease ABC subunit UvrC cofit 37 96
o Ralstonia solanacearum UW163 UW163_RS11990 excinuclease ABC subunit UvrC insig. 37 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20740 uvrC excinuclease ABC subunit UvrC cofit 37 90
o Ralstonia solanacearum PSI07 RPSI07_RS18935 excinuclease ABC subunit UvrC cofit 38 90
o Shewanella sp. ANA-3 Shewana3_1609 uvrC excinuclease ABC subunit C (RefSeq) insig. 37 91
o Erwinia amylovora T8 OLJFJH_15790 excinuclease ABC subunit UvrC insig. 37 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3847 Excinuclease ABC subunit C no data 38 92
o Cupriavidus basilensis FW507-4G11 RR42_RS14000 excinuclease ABC subunit C strong 37 91
o Shewanella loihica PV-4 Shew_1825 uvrC excinuclease ABC subunit C (RefSeq) strong 38 91
o Pectobacterium carotovorum WPP14 HER17_RS07715 excinuclease ABC subunit UvrC cofit 37 90