Homologs of GFF34 from Variovorax sp. SCN45

Uncharacterized metal-dependent hydrolase YcfH
SEED: Putative deoxyribonuclease YcfH
KEGG: TatD DNase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF34 Uncharacterized metal-dependent hydrolase YcfH insig. 100 100
o Variovorax sp. OAS795 ABID97_RS16000 TatD family hydrolase insig. 92 100
o Acidovorax sp. GW101-3H11 Ac3H11_2488 Putative deoxyribonuclease YcfH insig. 75 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4665 Putative deoxyribonuclease YcfH cofit 69 99
o Cupriavidus basilensis FW507-4G11 RR42_RS10885 DNAase sig. 61 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01010 TatD family deoxyribonuclease strong 58 99
o Ralstonia solanacearum UW163 UW163_RS14320 TatD family deoxyribonuclease insig. 58 99
o Ralstonia solanacearum GMI1000 RS_RS09020 TatD family deoxyribonuclease sig. 58 99
o Herbaspirillum seropedicae SmR1 HSERO_RS12995 DNAase insig. 58 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS21805 TatD family hydrolase cofit 60 99
o Methylophilus sp. DMC18 GFF632 putative metal-dependent hydrolase YcfH insig. 57 100
o Ralstonia solanacearum PSI07 RPSI07_RS16465 TatD family deoxyribonuclease cofit 57 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS12460 TatD family hydrolase insig. 57 99
o Burkholderia phytofirmans PsJN BPHYT_RS09640 DNAase cofit 58 99
o Paraburkholderia graminis OAS925 ABIE53_002166 TatD DNase family protein insig. 58 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00931 TatD DNase family protein insig. 57 99
o Dechlorosoma suillum PS Dsui_2652 hydrolase, TatD family cofit 58 98
o Castellaniella sp019104865 MT123 ABCV34_RS03960 TatD family hydrolase sig. 55 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1745 hydrolase, TatD family insig. 46 99
o Azospirillum brasilense Sp245 AZOBR_RS08795 LuxR family transcriptional regulator sig. 46 98
o Magnetospirillum magneticum AMB-1 AMB_RS12295 TatD family deoxyribonuclease insig. 47 99
o Azospirillum sp. SherDot2 MPMX19_01469 putative metal-dependent hydrolase YcfH cofit 45 98
o Pseudomonas fluorescens FW300-N2E3 AO353_01325 hydrolase TatD insig. 51 98
o Xanthobacter sp. DMC5 GFF695 D-aminoacyl-tRNA deacylase insig. 48 100
o Pseudomonas sp. DMC3 GFF4749 putative metal-dependent hydrolase YcfH insig. 50 98
o Rhodospirillum rubrum S1H Rru_A1700 TatD-related deoxyribonuclease (NCBI) sig. 47 98
o Rhodopseudomonas palustris CGA009 TX73_014390 TatD family hydrolase insig. 48 99
o Acinetobacter baumannii LAC-4 RR41_RS12075 TatD family hydrolase insig. 46 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2112 Putative deoxyribonuclease YcfH insig. 49 98
o Pseudomonas sp. RS175 PFR28_03002 putative metal-dependent hydrolase YcfH insig. 49 98
o Sphingobium sp. HT1-2 GFF5304 Uncharacterized metal-dependent hydrolase YcfH cofit 47 100
o Enterobacter sp. TBS_079 MPMX20_01780 putative metal-dependent hydrolase YcfH insig. 48 98
o Enterobacter asburiae PDN3 EX28DRAFT_1829 hydrolase, TatD family insig. 47 98
o Acinetobacter radioresistens SK82 MPMX26_01224 putative metal-dependent hydrolase YcfH insig. 46 99
o Pantoea sp. MT58 IAI47_12035 metal-dependent hydrolase insig. 48 98
o Pseudomonas orientalis W4I3 QF045_RS23485 TatD family hydrolase insig. 50 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5960 Putative deoxyribonuclease YcfH sig. 49 98
o Pseudomonas fluorescens FW300-N2C3 AO356_20205 hydrolase TatD insig. 49 98
o Klebsiella pneumoniae MKP103 KDGMDA_18730 metal-dependent hydrolase insig. 48 98
o Serratia liquefaciens MT49 IAI46_09825 metal-dependent hydrolase insig. 47 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05300 metal-dependent hydrolase insig. 48 98
o Pseudomonas simiae WCS417 PS417_21405 hydrolase TatD insig. 49 98
o Pseudomonas putida KT2440 PP_1967 tRNA D-aminoacylase insig. 48 98
o Pseudomonas fluorescens SBW25 PFLU_RS23020 TatD family hydrolase insig. 49 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23020 TatD family hydrolase insig. 49 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04425 putative metal-dependent hydrolase YcfH insig. 49 98
o Pseudomonas sp. BP01 JOY50_RS16755 TatD family hydrolase insig. 48 98
o Escherichia coli BL21 ECD_01096 putative DNase insig. 48 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02566 putative metal-dependent hydrolase YcfH insig. 48 98
o Pseudomonas stutzeri RCH2 Psest_1696 hydrolase, TatD family sig. 47 98
o Escherichia coli ECOR27 NOLOHH_21070 ycfH metal-dependent hydrolase no data 48 98
o Escherichia coli ECOR38 HEPCGN_23940 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC100 OKFHMN_03540 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC101 MCAODC_22900 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC102 NIAGMN_24290 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC62 BNILDI_19230 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC98 JDDGAC_07200 ycfH metal-dependent hydrolase insig. 48 98
o Escherichia coli ECRC99 KEDOAH_24215 ycfH metal-dependent hydrolase no data 48 98
o Escherichia coli Nissle 1917 ECOLIN_RS06350 metal-dependent hydrolase insig. 48 98
o Escherichia coli BW25113 b1100 ycfH predicted metallodependent hydrolase (NCBI) insig. 48 98
o Pseudomonas aeruginosa MRSN321 DY961_RS02180 TatD family hydrolase strong 49 98
o Pseudomonas aeruginosa PA14 IKLFDK_15055 hydrolase TatD sig. 49 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS33405 TatD family hydrolase strong 49 98
o Escherichia fergusonii Becca EFB2_02875 putative metal-dependent hydrolase YcfH insig. 47 98
o Pseudomonas sp. S08-1 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH insig. 48 98
o Shewanella amazonensis SB2B Sama_2040 TatD family hydrolase (RefSeq) insig. 46 99
o Pseudomonas syringae pv. syringae B728a Psyr_1655 TatD-related deoxyribonuclease insig. 49 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1655 TatD-related deoxyribonuclease insig. 49 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3382 Putative deoxyribonuclease YcfH insig. 47 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_420 Putative deoxyribonuclease YcfH insig. 48 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0126 hydrolase, TatD family insig. 46 98
o Dickeya dianthicola 67-19 HGI48_RS13150 metal-dependent hydrolase insig. 46 98
o Klebsiella michiganensis M5al BWI76_RS11125 metal-dependent hydrolase strong 46 98
o Pseudomonas segetis P6 ACVTMO_RS10350 TatD family hydrolase insig. 48 98
o Dickeya dadantii 3937 DDA3937_RS13085 metal-dependent hydrolase insig. 46 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_10060 YchF/TatD family DNA exonuclease insig. 45 98
o Shewanella oneidensis MR-1 SO2610 hydrolase, TatD family (NCBI ptt file) insig. 45 99
o Alteromonas macleodii MIT1002 MIT1002_01740 putative deoxyribonuclease YcfH insig. 44 98
o Dickeya dianthicola ME23 DZA65_RS13620 metal-dependent hydrolase insig. 46 98
o Pectobacterium carotovorum WPP14 HER17_RS08685 metal-dependent hydrolase insig. 45 98
o Rahnella sp. WP5 EX31_RS24470 metal-dependent hydrolase insig. 46 98
o Erwinia amylovora T8 OLJFJH_15495 metal-dependent hydrolase insig. 45 98
o Sinorhizobium meliloti 1021 SMc01193 hypothetical protein cofit 43 99
o Bosea sp. OAE506 ABIE41_RS15945 TatD family hydrolase insig. 45 96
o Erwinia tracheiphila SCR3 LU632_RS14785 metal-dependent hydrolase insig. 44 98
o Phaeobacter inhibens DSM 17395 PGA1_c07990 putative hydrolase, TatD family sig. 44 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_00645 metal-dependent hydrolase insig. 44 98
o Shewanella sp. ANA-3 Shewana3_1769 TatD family hydrolase (RefSeq) insig. 44 99
o Pseudomonas sp. SVBP6 COO64_RS05770 TatD family hydrolase insig. 47 98
o Shewanella loihica PV-4 Shew_1582 TatD family hydrolase (RefSeq) insig. 44 99
o Agrobacterium fabrum C58 Atu1495 hypothetical protein strong 43 96
o Dinoroseobacter shibae DFL-12 Dshi_0920 hydrolase, TatD family (RefSeq) insig. 45 98
o Rhizobium sp. OAE497 ABIE40_RS09480 TatD family hydrolase insig. 43 99
o Synechocystis sp000284455 PCC 6803 SGL_RS05935 TatD family hydrolase no data 40 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04755 TatD family hydrolase insig. 39 99
o Synechococcus elongatus PCC 7942 Synpcc7942_1521 tatD Sec-independent protein translocase TatD strong 40 98
o Caulobacter crescentus NA1000 CCNA_01898 Mg-dependent Dnase TatD strong 40 99
o Caulobacter crescentus NA1000 Δfur CCNA_01898 Mg-dependent Dnase TatD cofit 40 99
o Marinobacter adhaerens HP15 HP15_3420 hydrolase, TatD family sig. 36 97
o Fusobacterium nucleatum SB010 HUW76_08855 TatD family hydrolase strong 36 97