Homologs of Psest_3350 from Pseudomonas stutzeri RCH2

Diaminopimelate decarboxylase
SEED: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
KEGG: ornithine decarboxylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3350 Diaminopimelate decarboxylase sig. 100 100
o Pseudomonas sp. DMC3 GFF5011 Lysine/ornithine decarboxylase cofit 91 100
o Pseudomonas fluorescens SBW25 PFLU_RS04045 type III PLP-dependent enzyme cofit 91 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04045 type III PLP-dependent enzyme sig. 91 100
o Pseudomonas sp. SVBP6 COO64_RS04020 type III PLP-dependent enzyme insig. 91 100
o Pseudomonas fluorescens FW300-N2C3 AO356_07310 ornithine decarboxylase insig. 91 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01006 Lysine/ornithine decarboxylase cofit 91 100
o Pseudomonas orientalis W4I3 QF045_RS06990 type III PLP-dependent enzyme insig. 91 100
o Pseudomonas sp. BP01 JOY50_RS22710 type III PLP-dependent enzyme insig. 91 100
o Pseudomonas putida KT2440 PP_0864 ornithine decarboxylase sig. 91 100
o Pseudomonas sp. RS175 PFR28_00113 Lysine/ornithine decarboxylase insig. 91 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3334 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) sig. 91 100
o Pseudomonas simiae WCS417 PS417_04005 ornithine decarboxylase sig. 91 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1136 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) insig. 91 100
o Pseudomonas fluorescens FW300-N2E3 AO353_05445 ornithine decarboxylase insig. 91 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5067 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) strong 91 100
o Pseudomonas syringae pv. syringae B728a Psyr_4247 ornithine decarboxylase insig. 91 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4247 ornithine decarboxylase insig. 91 100
o Pseudomonas aeruginosa MRSN321 DY961_RS23875 type III PLP-dependent enzyme insig. 89 100
o Pseudomonas aeruginosa PA14 IKLFDK_01485 ornithine decarboxylase insig. 89 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS56340 type III PLP-dependent enzyme insig. 89 100
o Pseudomonas segetis P6 ACVTMO_RS19280 type III PLP-dependent enzyme insig. 88 100
o Pseudomonas sp. S08-1 OH686_08755 Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase cofit 86 100
o Marinobacter adhaerens HP15 HP15_3785 ornithine decarboxylase insig. 80 99
o Shewanella loihica PV-4 Shew_3392 ornithine decarboxylase (RefSeq) insig. 73 99
o Shewanella amazonensis SB2B Sama_0410 ornithine decarboxylase (RefSeq) insig. 73 100
o Shewanella oneidensis MR-1 SO4136 decarboxylase, pyridoxal-dependent (NCBI ptt file) sig. 71 100
o Shewanella sp. ANA-3 Shewana3_3682 ornithine decarboxylase (RefSeq) insig. 70 100
o Azospirillum brasilense Sp245 AZOBR_RS00105 ornithine decarboxylase strong 55 95
o Magnetospirillum magneticum AMB-1 AMB_RS07020 type III PLP-dependent enzyme insig. 56 94
o Azospirillum sp. SherDot2 MPMX19_00433 Lysine/ornithine decarboxylase insig. 52 96
o Rhizobium sp. OAE497 ABIE40_RS16685 ornithine/lysine decarboxylase no data 49 97
o Xanthobacter sp. DMC5 GFF4005 Lysine/ornithine decarboxylase sig. 50 94
o Rhodopseudomonas palustris CGA009 TX73_004485 type III PLP-dependent enzyme sig. 49 93
o Sinorhizobium meliloti 1021 SMc02983 ornithine, DAP, or arginine decarboxylase strong 51 94
o Agrobacterium fabrum C58 Atu3196 ornithine decarboxylase no data 49 94
o Bosea sp. OAE506 ABIE41_RS08335 type III PLP-dependent enzyme no data 47 94
o Rhodospirillum rubrum S1H Rru_A1693 Orn/DAP/Arg decarboxylase 2 (NCBI) insig. 50 96
o Phaeobacter inhibens DSM 17395 PGA1_c03800 putative lysine/ornithine decarboxylase strong 45 94
o Dinoroseobacter shibae DFL-12 Dshi_1375 Ornithine decarboxylase (RefSeq) insig. 45 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14915 type III PLP-dependent enzyme no data 32 92
o Caulobacter crescentus NA1000 CCNA_00365 ornithine decarboxylase no data 31 92
o Caulobacter crescentus NA1000 Δfur CCNA_00365 ornithine decarboxylase no data 31 92
  Phaeobacter inhibens DSM 17395 PGA1_c11650 putative lysine/ornithine decarboxylase insig. 27 92
  Azospirillum sp. SherDot2 MPMX19_05819 Diaminopimelate decarboxylase no data 29 88
  Pseudomonas syringae pv. syringae B728a Psyr_2547 Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 insig. 28 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2547 Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 insig. 28 93
  Marinobacter adhaerens HP15 HP15_247 diaminopimelate decarboxylase no data 29 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3753 Diaminopimelate decarboxylase no data 29 85
  Azospirillum brasilense Sp245 AZOBR_RS10225 diaminopimelate decarboxylase insig. 31 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_00635 diaminopimelate decarboxylase insig. 27 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU1647 lysA-1 diaminopimelate decarboxylase (TIGR) insig. 29 93
  Desulfovibrio vulgaris Miyazaki F DvMF_0353 diaminopimelate decarboxylase (RefSeq) sig. 28 93
  Pseudomonas putida KT2440 PP_5227 diaminopimelate decarboxylase strong 28 91
  Pseudomonas sp. SVBP6 COO64_RS01255 lysA diaminopimelate decarboxylase insig. 28 91
  Dinoroseobacter shibae DFL-12 Dshi_3059 diaminopimelate decarboxylase (RefSeq) no data 27 94
  Magnetospirillum magneticum AMB-1 AMB_RS22725 diaminopimelate decarboxylase no data 27 92
  Pseudomonas syringae pv. syringae B728a Psyr_0182 diaminopimelate decarboxylase no data 29 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0182 diaminopimelate decarboxylase no data 29 91
  Acinetobacter radioresistens SK82 MPMX26_02232 Diaminopimelate decarboxylase strong 28 91
  Variovorax sp. OAS795 ABID97_RS23305 diaminopimelate decarboxylase no data 27 93
  Variovorax sp. SCN45 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 27 92
  Castellaniella sp019104865 MT123 ABCV34_RS12685 diaminopimelate decarboxylase no data 29 94
  Pseudomonas segetis P6 ACVTMO_RS22510 lysA diaminopimelate decarboxylase strong 28 91
  Caulobacter crescentus NA1000 CCNA_02296 diaminopimelate decarboxylase no data 28 92
  Caulobacter crescentus NA1000 Δfur CCNA_02296 diaminopimelate decarboxylase no data 28 92
  Ralstonia solanacearum PSI07 RPSI07_RS10250 diaminopimelate decarboxylase no data 28 92
  Azospirillum sp. SherDot2 MPMX19_01174 Diaminopimelate decarboxylase insig. 31 95
o Sphingobium sp. HT1-2 GFF100 Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase (EC 4.1.1.17) no data 30 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06990 diaminopimelate decarboxylase no data 28 92
  Ralstonia solanacearum UW163 UW163_RS06625 diaminopimelate decarboxylase no data 28 92
  Alteromonas macleodii MIT1002 MIT1002_00160 Diaminopimelate decarboxylase strong 27 90
  Pseudomonas stutzeri RCH2 Psest_3764 diaminopimelate decarboxylase no data 27 91
  Methylophilus sp. DMC18 GFF2209 Diaminopimelate decarboxylase no data 26 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0272 pyridoxal-dependent decarboxylase, exosortase A system-associated no data 26 94
  Magnetospirillum magneticum AMB-1 AMB_RS05600 type III PLP-dependent enzyme insig. 33 85
  Ralstonia solanacearum GMI1000 RS_RS14930 diaminopimelate decarboxylase no data 28 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS02640 diaminopimelate decarboxylase strong 28 92
  Pseudomonas aeruginosa MRSN321 DY961_RS12270 lysA;go_function=diaminopimelate diaminopimelate decarboxylase strong 28 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS49855 lysA;go_function=diaminopimelate diaminopimelate decarboxylase strong 28 91
  Pseudomonas aeruginosa PA14 IKLFDK_27065 diaminopimelate decarboxylase strong 28 91
  Shewanella oneidensis MR-1 SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) strong 27 91
  Shewanella sp. ANA-3 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) strong 28 91
  Rhodanobacter denitrificans MT42 LRK55_RS11215 diaminopimelate decarboxylase insig. 26 94
  Pseudomonas sp. DMC3 GFF367 Diaminopimelate decarboxylase no data 28 91
  Azospirillum brasilense Sp245 AZOBR_RS16945 diaminopimelate decarboxylase no data 27 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11485 diaminopimelate decarboxylase insig. 26 94
  Pseudomonas simiae WCS417 PS417_27580 diaminopimelate decarboxylase no data 28 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 28 91
  Acinetobacter baumannii LAC-4 RR41_RS04435 diaminopimelate decarboxylase sig. 28 91
  Sphingobium sp. HT1-2 GFF3795 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 25 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 28 91
  Pseudomonas fluorescens FW300-N2E3 AO353_09035 diaminopimelate decarboxylase no data 28 91
  Rhodopseudomonas palustris CGA009 TX73_024635 diaminopimelate decarboxylase no data 26 91
  Agrobacterium fabrum C58 Atu1673 diaminopimelate decarboxylase insig. 28 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1925 Diaminopimelate decarboxylase (EC 4.1.1.20) insig. 25 94
  Methanococcus maripaludis JJ MMJJ_RS08170 diaminopimelate decarboxylase insig. 29 91
  Phaeobacter inhibens DSM 17395 PGA1_c03470 diaminopimelate decarboxylase LysA no data 28 92
  Pseudomonas sp. S08-1 OH686_13800 diaminopimelate decarboxylase cofit 28 91
  Dechlorosoma suillum PS Dsui_1182 diaminopimelate decarboxylase no data 27 94