Homologs of Psest_3350 from Pseudomonas stutzeri RCH2

Diaminopimelate decarboxylase
SEED: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
KEGG: ornithine decarboxylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3350 Diaminopimelate decarboxylase sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS04045 type III PLP-dependent enzyme cofit 91 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04045 type III PLP-dependent enzyme sig. 91 100
o Pseudomonas fluorescens FW300-N2C3 AO356_07310 ornithine decarboxylase insig. 91 100
o Pseudomonas putida KT2440 PP_0864 ornithine decarboxylase sig. 91 100
o Pseudomonas sp. RS175 PFR28_00113 Lysine/ornithine decarboxylase insig. 91 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3334 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) sig. 91 100
o Pseudomonas simiae WCS417 PS417_04005 ornithine decarboxylase sig. 91 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1136 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) insig. 91 100
o Pseudomonas fluorescens FW300-N2E3 AO353_05445 ornithine decarboxylase insig. 91 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5067 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) strong 91 100
o Pseudomonas syringae pv. syringae B728a Psyr_4247 ornithine decarboxylase insig. 91 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4247 ornithine decarboxylase insig. 91 100
o Pseudomonas sp. S08-1 OH686_08755 Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase cofit 86 100
o Marinobacter adhaerens HP15 HP15_3785 ornithine decarboxylase insig. 80 99
o Shewanella loihica PV-4 Shew_3392 ornithine decarboxylase (RefSeq) insig. 73 99
o Shewanella amazonensis SB2B Sama_0410 ornithine decarboxylase (RefSeq) insig. 73 100
o Shewanella oneidensis MR-1 SO4136 decarboxylase, pyridoxal-dependent (NCBI ptt file) sig. 71 100
o Shewanella sp. ANA-3 Shewana3_3682 ornithine decarboxylase (RefSeq) insig. 70 100
o Azospirillum brasilense Sp245 AZOBR_RS00105 ornithine decarboxylase strong 55 95
o Magnetospirillum magneticum AMB-1 AMB_RS07020 type III PLP-dependent enzyme insig. 56 94
o Azospirillum sp. SherDot2 MPMX19_00433 Lysine/ornithine decarboxylase insig. 52 96
o Rhizobium sp. OAE497 ABIE40_RS16685 ornithine/lysine decarboxylase no data 49 97
o Sinorhizobium meliloti 1021 SMc02983 ornithine, DAP, or arginine decarboxylase strong 51 94
o Rhodopseudomonas palustris CGA009 TX73_004485 type III PLP-dependent enzyme sig. 49 93
o Agrobacterium fabrum C58 Atu3196 ornithine decarboxylase no data 49 94
o Bosea sp. OAE506 ABIE41_RS08335 type III PLP-dependent enzyme no data 47 94
o Rhodospirillum rubrum S1H Rru_A1693 Orn/DAP/Arg decarboxylase 2 (NCBI) insig. 50 96
o Phaeobacter inhibens DSM 17395 PGA1_c03800 putative lysine/ornithine decarboxylase strong 45 94
o Dinoroseobacter shibae DFL-12 Dshi_1375 Ornithine decarboxylase (RefSeq) insig. 45 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14915 type III PLP-dependent enzyme no data 32 92
o Caulobacter crescentus NA1000 CCNA_00365 ornithine decarboxylase no data 31 92
o Caulobacter crescentus NA1000 Δfur CCNA_00365 ornithine decarboxylase no data 31 92
  Phaeobacter inhibens DSM 17395 PGA1_c11650 putative lysine/ornithine decarboxylase insig. 27 92
  Azospirillum sp. SherDot2 MPMX19_05819 Diaminopimelate decarboxylase no data 29 88
  Pseudomonas syringae pv. syringae B728a Psyr_2547 Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 insig. 28 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2547 Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 insig. 28 93
  Marinobacter adhaerens HP15 HP15_247 diaminopimelate decarboxylase no data 29 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3753 Diaminopimelate decarboxylase no data 29 85
  Azospirillum brasilense Sp245 AZOBR_RS10225 diaminopimelate decarboxylase insig. 31 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_00635 diaminopimelate decarboxylase insig. 27 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU1647 lysA-1 diaminopimelate decarboxylase (TIGR) insig. 29 93
  Desulfovibrio vulgaris Miyazaki F DvMF_0353 diaminopimelate decarboxylase (RefSeq) sig. 28 93
  Pseudomonas putida KT2440 PP_5227 diaminopimelate decarboxylase strong 28 91
  Dinoroseobacter shibae DFL-12 Dshi_3059 diaminopimelate decarboxylase (RefSeq) no data 27 94
  Magnetospirillum magneticum AMB-1 AMB_RS22725 diaminopimelate decarboxylase no data 27 92
  Pseudomonas syringae pv. syringae B728a Psyr_0182 diaminopimelate decarboxylase no data 29 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0182 diaminopimelate decarboxylase no data 29 91
  Variovorax sp. OAS795 ABID97_RS23305 diaminopimelate decarboxylase no data 27 93
  Acinetobacter radioresistens SK82 MPMX26_02232 Diaminopimelate decarboxylase strong 28 91
  Variovorax sp. SCN45 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 27 92
  Castellaniella sp019104865 MT123 ABCV34_RS12685 diaminopimelate decarboxylase no data 29 94
  Caulobacter crescentus NA1000 CCNA_02296 diaminopimelate decarboxylase no data 28 92
  Caulobacter crescentus NA1000 Δfur CCNA_02296 diaminopimelate decarboxylase no data 28 92
  Ralstonia solanacearum PSI07 RPSI07_RS10250 diaminopimelate decarboxylase no data 28 92
  Azospirillum sp. SherDot2 MPMX19_01174 Diaminopimelate decarboxylase insig. 31 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06990 diaminopimelate decarboxylase no data 28 92
  Ralstonia solanacearum UW163 UW163_RS06625 diaminopimelate decarboxylase no data 28 92
  Alteromonas macleodii MIT1002 MIT1002_00160 Diaminopimelate decarboxylase strong 27 90
  Pseudomonas stutzeri RCH2 Psest_3764 diaminopimelate decarboxylase no data 27 91
  Kangiella aquimarina DSM 16071 B158DRAFT_0272 pyridoxal-dependent decarboxylase, exosortase A system-associated no data 26 94
  Magnetospirillum magneticum AMB-1 AMB_RS05600 type III PLP-dependent enzyme insig. 33 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS02640 diaminopimelate decarboxylase strong 28 92
  Ralstonia solanacearum GMI1000 RS_RS14930 diaminopimelate decarboxylase no data 28 92
  Shewanella oneidensis MR-1 SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) strong 27 91
  Shewanella sp. ANA-3 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) strong 28 91
  Rhodanobacter denitrificans MT42 LRK55_RS11215 diaminopimelate decarboxylase cofit 26 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11485 diaminopimelate decarboxylase insig. 26 94
  Azospirillum brasilense Sp245 AZOBR_RS16945 diaminopimelate decarboxylase no data 27 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 28 91
  Pseudomonas simiae WCS417 PS417_27580 diaminopimelate decarboxylase no data 28 91
  Rhodopseudomonas palustris CGA009 TX73_024635 diaminopimelate decarboxylase no data 26 91
  Agrobacterium fabrum C58 Atu1673 diaminopimelate decarboxylase insig. 28 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 28 91
  Pseudomonas fluorescens FW300-N2E3 AO353_09035 diaminopimelate decarboxylase no data 28 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1925 Diaminopimelate decarboxylase (EC 4.1.1.20) insig. 25 94
  Methanococcus maripaludis JJ MMJJ_RS08170 diaminopimelate decarboxylase insig. 29 91
  Phaeobacter inhibens DSM 17395 PGA1_c03470 diaminopimelate decarboxylase LysA no data 28 92
  Pseudomonas sp. S08-1 OH686_13800 diaminopimelate decarboxylase cofit 28 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS28080 diaminopimelate decarboxylase strong 29 92
  Pseudomonas fluorescens SBW25 PFLU_RS29265 diaminopimelate decarboxylase cofit 28 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29265 diaminopimelate decarboxylase no data 28 91
  Dechlorosoma suillum PS Dsui_1182 diaminopimelate decarboxylase no data 27 94
  Methanococcus maripaludis S2 MMP_RS06180 diaminopimelate decarboxylase no data 28 91
  Shewanella loihica PV-4 Shew_0322 diaminopimelate decarboxylase (RefSeq) strong 27 94
  Burkholderia phytofirmans PsJN BPHYT_RS17930 diaminopimelate decarboxylase insig. 29 90
  Bosea sp. OAE506 ABIE41_RS08740 diaminopimelate decarboxylase no data 25 92
  Sinorhizobium meliloti 1021 SMc00723 diaminopimelate DAP decarboxylase no data 28 88
  Pseudomonas fluorescens FW300-N2C3 AO356_12740 diaminopimelate decarboxylase no data 27 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4419 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 27 91
  Pseudomonas sp. RS175 PFR28_04375 Diaminopimelate decarboxylase no data 28 91
  Agrobacterium fabrum C58 Atu3601 diaminopimelate decarboxylase no data 28 88
  Paraburkholderia graminis OAS925 ABIE53_003749 diaminopimelate decarboxylase strong 27 94
  Rhodanobacter sp. FW510-T8 OKGIIK_12375 lysA diaminopimelate decarboxylase insig. 26 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12545 diaminopimelate decarboxylase strong 28 94
  Rhizobium sp. OAE497 ABIE40_RS17530 diaminopimelate decarboxylase strong 27 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1341 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 26 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02390 diaminopimelate decarboxylase insig. 26 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05606 diaminopimelate decarboxylase no data 29 90
  Cupriavidus basilensis FW507-4G11 RR42_RS19050 diaminopimelate decarboxylase no data 28 82