Homologs of GFF2028 from Xanthobacter sp. DMC5

D-malate dehydrogenase [decarboxylating]
SEED: Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83)
KEGG: tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2028 D-malate dehydrogenase [decarboxylating] insig. 100 100
o Bosea sp. OAE506 ABIE41_RS22540 tartrate dehydrogenase insig. 76 99
o Rhodopseudomonas palustris CGA009 TX73_008960 tartrate dehydrogenase insig. 75 99
o Dinoroseobacter shibae DFL-12 Dshi_0775 tartrate dehydrogenase (RefSeq) insig. 76 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02600 tartrate dehydrogenase insig. 75 98
o Dickeya dadantii 3937 DDA3937_RS04645 tartrate dehydrogenase insig. 74 100
o Dickeya dianthicola ME23 DZA65_RS04525 tartrate dehydrogenase insig. 74 100
o Dickeya dianthicola 67-19 HGI48_RS04605 tartrate dehydrogenase insig. 75 97
o Pantoea sp. MT58 IAI47_17525 tartrate dehydrogenase sig. 73 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09590 tartrate dehydrogenase cofit 73 100
o Castellaniella sp019104865 MT123 ABCV34_RS14695 tartrate dehydrogenase insig. 71 99
o Variovorax sp. SCN45 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) insig. 71 98
o Herbaspirillum seropedicae SmR1 HSERO_RS07390 tartrate dehydrogenase strong 70 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) cofit 70 98
o Acidovorax sp. GW101-3H11 Ac3H11_375 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 70 98
o Variovorax sp. OAS795 ABID97_RS10660 tartrate dehydrogenase sig. 70 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase insig. 68 99
o Paraburkholderia graminis OAS925 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase sig. 68 99
o Burkholderia phytofirmans PsJN BPHYT_RS30235 tartrate dehydrogenase insig. 68 99
o Serratia liquefaciens MT49 IAI46_21025 tartrate dehydrogenase insig. 67 99
o Klebsiella michiganensis M5al BWI76_RS10680 tartrate dehydrogenase sig. 67 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS32005 tartrate dehydrogenase insig. 68 99
o Escherichia coli ECRC100 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase cofit 68 98
o Escherichia coli ECRC101 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase insig. 68 98
o Escherichia coli ECRC102 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase cofit 68 98
o Escherichia coli ECRC98 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase insig. 68 98
o Escherichia coli ECRC99 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase no data 68 98
o Escherichia coli ECRC62 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase cofit 68 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] insig. 68 98
o Escherichia coli BW25113 b1800 yeaU predicted dehydrogenase (NCBI) insig. 68 98
o Escherichia coli ECOR27 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase insig. 68 98
o Escherichia coli BL21 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase cofit 67 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS21505 tartrate dehydrogenase insig. 68 97
o Escherichia coli ECOR38 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase insig. 67 98
o Ralstonia solanacearum PSI07 RPSI07_RS07555 tartrate dehydrogenase insig. 68 100
o Acinetobacter baumannii LAC-4 RR41_RS15025 tartrate dehydrogenase insig. 65 99
o Pseudomonas fluorescens FW300-N2E3 AO353_28225 tartrate dehydrogenase insig. 67 99
o Ralstonia solanacearum GMI1000 RS_RS24845 tartrate dehydrogenase insig. 67 100
  Ralstonia solanacearum PSI07 RPSI07_RS04610 tartrate dehydrogenase insig. 67 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 67 99
  Variovorax sp. OAS795 ABID97_RS25885 tartrate dehydrogenase insig. 68 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) insig. 66 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03842 D-malate dehydrogenase [decarboxylating] cofit 67 99
o Klebsiella pneumoniae MKP103 KDGMDA_18320 tartrate dehydrogenase insig. 66 98
  Acidovorax sp. GW101-3H11 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 67 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16145 tartrate dehydrogenase sig. 66 100
o Ralstonia solanacearum UW163 UW163_RS16880 tartrate dehydrogenase insig. 66 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18940 tartrate dehydrogenase no data 67 97
  Ralstonia solanacearum UW163 UW163_RS20190 tartrate dehydrogenase insig. 67 97
o Pseudomonas fluorescens SBW25 PFLU_RS19735 tartrate dehydrogenase insig. 65 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19735 tartrate dehydrogenase insig. 65 99
o Pseudomonas sp. BP01 JOY50_RS08040 tartrate dehydrogenase insig. 65 98
o Pseudomonas fluorescens FW300-N2C3 AO356_26735 tartrate dehydrogenase insig. 66 99
o Pseudomonas syringae pv. syringae B728a Psyr_2396 Tartrate dehydrogenase insig. 65 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2396 Tartrate dehydrogenase insig. 65 99
  Variovorax sp. SCN45 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) strong 67 99
o Phaeobacter inhibens DSM 17395 PGA1_c17990 D-malate dehydrogenase insig. 60 99
  Acidovorax sp. GW101-3H11 Ac3H11_635 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 51 97
  Bosea sp. OAE506 ABIE41_RS12745 tartrate dehydrogenase insig. 50 99
  Burkholderia phytofirmans PsJN BPHYT_RS25050 3-isopropylmalate dehydrogenase no data 50 99
  Variovorax sp. SCN45 GFF7170 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) insig. 50 97
o Magnetospirillum magneticum AMB-1 AMB_RS16020 tartrate dehydrogenase no data 49 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2675 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 49 99
  Ralstonia solanacearum GMI1000 RS_RS21930 tartrate dehydrogenase insig. 49 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS37830 tartrate dehydrogenase insig. 49 98
  Ralstonia solanacearum PSI07 RPSI07_RS04410 tartrate dehydrogenase insig. 49 98
  Paraburkholderia graminis OAS925 ABIE53_005150 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase insig. 49 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01534 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase insig. 50 94
  Variovorax sp. OAS795 ABID97_RS29220 tartrate dehydrogenase no data 48 99
o Sinorhizobium meliloti 1021 SMa1846 3-isopropylmalate dehydrogenase insig. 50 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17030 tartrate dehydrogenase insig. 48 99
  Ralstonia solanacearum UW163 UW163_RS18420 tartrate dehydrogenase insig. 48 99
  Cupriavidus basilensis FW507-4G11 RR42_RS33755 tartrate dehydrogenase insig. 51 99
  Klebsiella pneumoniae MKP103 KDGMDA_19535 tartrate dehydrogenase insig. 48 99
o Agrobacterium fabrum C58 Atu3402 3-isopropylmalate dehydrogenase insig. 52 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4412 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) insig. 50 97
o Azospirillum sp. SherDot2 MPMX19_06850 putative tartrate dehydrogenase/decarboxylase TtuC' insig. 52 88
o Bifidobacterium breve UCC2003 BBR_RS12870 3-isopropylmalate dehydrogenase strong 47 92
o Mycobacterium tuberculosis H37Rv Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) no data 46 94
o Marinobacter adhaerens HP15 HP15_817 3-isopropylmalate dehydrogenase insig. 41 98
o Methanococcus maripaludis JJ MMJJ_RS02220 3-isopropylmalate dehydrogenase no data 37 97
o Methanococcus maripaludis S2 MMP_RS04575 homoisocitrate dehydrogenase no data 37 98
  Methanococcus maripaludis JJ MMJJ_RS00560 homoisocitrate dehydrogenase strong 36 98
  Methanococcus maripaludis S2 MMP_RS02855 3-isopropylmalate dehydrogenase no data 37 97
o Lysobacter sp. OAE881 ABIE51_RS14200 isocitrate dehydrogenase no data 37 97
  Shewanella oneidensis MR-1 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) strong 41 91
  Bosea sp. OAE506 ABIE41_RS06655 isocitrate/isopropylmalate family dehydrogenase insig. 36 100
  Shewanella sp. ANA-3 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) strong 41 91
  Dickeya dadantii 3937 DDA3937_RS18120 3-isopropylmalate dehydrogenase strong 40 98
  Dickeya dianthicola 67-19 HGI48_RS18060 3-isopropylmalate dehydrogenase strong 39 98
  Dickeya dianthicola ME23 DZA65_RS19205 3-isopropylmalate dehydrogenase strong 39 98
  Serratia liquefaciens MT49 IAI46_03350 3-isopropylmalate dehydrogenase cofit 39 96
  Escherichia coli Nissle 1917 ECOLIN_RS00395 3-isopropylmalate dehydrogenase strong 39 96
  Escherichia fergusonii Becca EFB2_03972 3-isopropylmalate dehydrogenase insig. 39 96
  Escherichia coli ECOR38 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase strong 39 96
  Escherichia coli BL21 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent strong 39 96
  Escherichia coli ECOR27 NOLOHH_03065 leuA 2-isopropylmalate synthase strong 39 96
  Escherichia coli ECRC62 BNILDI_08545 leuA 2-isopropylmalate synthase strong 39 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03584 3-isopropylmalate dehydrogenase insig. 39 96
  Escherichia coli BW25113 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) strong 39 96