Homologs of PS417_05190 from Pseudomonas simiae WCS417

ribonuclease III
SEED: Ribonuclease III (EC 3.1.26.3)
KEGG: ribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_05190 ribonuclease III no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS05260 ribonuclease III no data 99 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05260 ribonuclease III no data 99 100
o Pseudomonas syringae pv. syringae B728a Psyr_3951 RNAse III no data 95 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3951 RNAse III no data 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_04510 ribonuclease III no data 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) no data 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17495 ribonuclease III no data 92 100
o Pseudomonas sp. SVBP6 COO64_RS16555 rnc ribonuclease III no data 92 100
o Pseudomonas sp. BP01 JOY50_RS14695 rnc ribonuclease III no data 88 100
o Pseudomonas putida KT2440 PP_1433 Ribonuclease 3 no data 87 100
o Pseudomonas stutzeri RCH2 Psest_3092 ribonuclease III, bacterial strong 87 100
o Pseudomonas aeruginosa PA14 IKLFDK_03305 ribonuclease III no data 83 100
o Pseudomonas sp. RS175 PFR28_03523 Ribonuclease 3 no data 93 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4840 Ribonuclease III (EC 3.1.26.3) no data 94 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_892 Ribonuclease III (EC 3.1.26.3) no data 93 91
o Pseudomonas sp. DMC3 GFF1957 Ribonuclease 3 no data 91 91
o Pseudomonas sp. S08-1 OH686_20080 ribonuclease III no data 88 91
o Marinobacter adhaerens HP15 HP15_784 ribonuclease 3 insig. 61 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_12455 ribonuclease 3 no data 56 96
o Pantoea sp. MT58 IAI47_04880 ribonuclease III no data 54 98
o Erwinia amylovora T8 OLJFJH_10255 ribonuclease III no data 53 97
o Erwinia tracheiphila SCR3 LU632_RS15385 rnc ribonuclease III insig. 54 98
o Klebsiella michiganensis M5al BWI76_RS21320 ribonuclease 3 no data 55 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2475 Ribonuclease III (EC 3.1.26.3) strong 54 90
o Enterobacter asburiae PDN3 EX28DRAFT_0079 ribonuclease III, bacterial no data 54 90
o Escherichia coli BL21 ECD_02461 RNase III no data 54 90
o Escherichia fergusonii Becca EFB2_01329 Ribonuclease 3 no data 54 90
o Escherichia coli ECOR27 NOLOHH_13085 rnc ribonuclease III no data 54 90
o Escherichia coli ECOR38 HEPCGN_20555 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC100 OKFHMN_21410 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC101 MCAODC_11940 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC102 NIAGMN_19180 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC62 BNILDI_11885 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC98 JDDGAC_25075 rnc ribonuclease III no data 54 90
o Escherichia coli ECRC99 KEDOAH_06810 rnc ribonuclease III no data 54 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01140 Ribonuclease 3 no data 54 90
o Escherichia coli Nissle 1917 ECOLIN_RS14530 ribonuclease III no data 54 90
o Escherichia coli BW25113 b2567 rnc ribonuclease III (NCBI) strong 54 90
o Enterobacter sp. TBS_079 MPMX20_03438 Ribonuclease 3 no data 54 90
o Shewanella amazonensis SB2B Sama_0880 rnc ribonuclease III (RefSeq) no data 55 94
o Shewanella sp. ANA-3 Shewana3_3026 rnc ribonuclease III (RefSeq) no data 54 94
o Methylophilus sp. DMC18 GFF2738 Ribonuclease 3 cofit 52 96
o Pectobacterium carotovorum WPP14 HER17_RS05815 ribonuclease III no data 53 90
o Shewanella oneidensis MR-1 SO1348 rnc ribonuclease III (NCBI ptt file) no data 53 94
o Shewanella loihica PV-4 Shew_1054 ribonuclease III (RefSeq) no data 56 94
o Dickeya dadantii 3937 DDA3937_RS15735 ribonuclease III no data 52 90
o Dickeya dianthicola ME23 DZA65_RS16900 ribonuclease III no data 52 90
o Dickeya dianthicola 67-19 HGI48_RS15820 ribonuclease III no data 52 90
o Kangiella aquimarina DSM 16071 B158DRAFT_2187 ribonuclease III, bacterial sig. 55 94
o Rahnella sp. WP5 EX31_RS21835 ribonuclease III no data 54 98
o Serratia liquefaciens MT49 IAI46_19550 ribonuclease III no data 54 90
o Alteromonas macleodii MIT1002 MIT1002_02713 Ribonuclease 3 no data 54 91
o Dechlorosoma suillum PS Dsui_2460 ribonuclease III no data 53 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3673.1 Ribonuclease III (EC 3.1.26.3) no data 49 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07150 ribonuclease III no data 53 91
o Rhodanobacter sp. FW510-T8 OKGIIK_07870 rnc ribonuclease III cofit 52 91
  Herbaspirillum seropedicae SmR1 HSERO_RS09660 ribonuclease III strong 51 94
o Rhodanobacter denitrificans MT42 LRK55_RS16685 ribonuclease III strong 53 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16970 ribonuclease III strong 53 91
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11975 ribonuclease III no data 53 90
o Acinetobacter radioresistens SK82 MPMX26_02156 Ribonuclease 3 no data 49 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14485 ribonuclease III no data 49 95
o Ralstonia solanacearum UW163 UW163_RS11950 ribonuclease III no data 49 95
o Ralstonia solanacearum PSI07 RPSI07_RS18975 ribonuclease III no data 49 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS10205 ribonuclease III no data 49 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3346 Ribonuclease III (EC 3.1.26.3) no data 50 93
o Ralstonia solanacearum GMI1000 RS_RS05265 ribonuclease 3 no data 49 95
o Variovorax sp. SCN45 GFF3870 Ribonuclease III (EC 3.1.26.3) strong 52 96
o Castellaniella sp019104865 MT123 ABCV34_RS08325 ribonuclease III no data 51 88
o Lysobacter sp. OAE881 ABIE51_RS13860 ribonuclease III no data 49 86
o Variovorax sp. OAS795 ABID97_RS08365 ribonuclease III strong 51 97
o Cupriavidus basilensis FW507-4G11 RR42_RS14040 ribonuclease III no data 48 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS04610 ribonuclease III insig. 49 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04362 RNAse III (EC 3.1.26.3) insig. 49 87
  Paraburkholderia graminis OAS925 ABIE53_003036 ribonuclease-3 sig. 49 87
o Acidovorax sp. GW101-3H11 Ac3H11_1566 Ribonuclease III (EC 3.1.26.3) no data 50 91
  Burkholderia phytofirmans PsJN BPHYT_RS14370 ribonuclease III insig. 48 83
o Azospirillum sp. SherDot2 MPMX19_00843 Ribonuclease 3 no data 41 98
o Magnetospirillum magneticum AMB-1 AMB_RS11425 ribonuclease III cofit 43 94
o Bosea sp. OAE506 ABIE41_RS19930 ribonuclease III no data 43 93
o Desulfovibrio vulgaris Miyazaki F DvMF_0243 rnc ribonuclease III (RefSeq) no data 44 94
o Rhodospirillum rubrum S1H Rru_A1852 Ribonuclease III (NCBI) no data 43 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05535 ribonuclease III no data 42 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU1440 rnc ribonuclease III (TIGR) no data 41 96
o Fusobacterium nucleatum SB010 HUW76_02250 ribonuclease III no data 35 99
o Dinoroseobacter shibae DFL-12 Dshi_0200 Ribonuclease III (RefSeq) no data 44 84
o Azospirillum brasilense Sp245 AZOBR_RS22070 ribonuclease III no data 38 98
o Rhodopseudomonas palustris CGA009 TX73_013975 ribonuclease III insig. 41 96
o Phaeobacter inhibens DSM 17395 PGA1_c01060 ribonuclease 3 sig. 40 94
o Mycobacterium tuberculosis H37Rv Rv2925c Probable ribonuclease III Rnc (RNase III) no data 42 86
o Caulobacter crescentus NA1000 CCNA_01630 ribonuclease III no data 44 83
o Caulobacter crescentus NA1000 Δfur CCNA_01630 ribonuclease III no data 44 83
o Synechocystis sp000284455 PCC 6803 SGL_RS11650 ribonuclease III strong 37 90
o Xanthobacter sp. DMC5 GFF623 Ribonuclease 3 no data 38 84
o Agrobacterium fabrum C58 Atu1035 ribonuclease III no data 39 96
o Sinorhizobium meliloti 1021 SMc02652 ribonuclease III no data 39 96
o Bifidobacterium breve UCC2003 BBR_RS12355 ribonuclease III strong 35 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00745 ribonuclease III sig. 35 93
o Methanococcus maripaludis JJ MMJJ_RS06515 ribonuclease III insig. 34 96