Homologs of CSW01_11870 from Vibrio cholerae E7946 ATCC 55056

DNA repair protein RadA
SEED: DNA repair protein RadA
KEGG: DNA repair protein RadA/Sms

218 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_11870 DNA repair protein RadA cofit 100 100
o Escherichia coli ECOR38 HEPCGN_09195 radA DNA repair protein RadA insig. 81 99
o Escherichia coli BL21 ECD_04265 DNA repair protein strong 81 100
o Escherichia fergusonii Becca EFB2_04057 DNA repair protein RadA insig. 81 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03672 DNA repair protein RadA insig. 81 100
o Escherichia coli Nissle 1917 ECOLIN_RS25190 DNA repair protein RadA insig. 81 100
o Escherichia coli BW25113 b4389 radA predicted repair protein (NCBI) strong 81 100
o Escherichia coli ECOR27 NOLOHH_03520 radA DNA repair protein RadA insig. 81 99
o Escherichia coli ECRC100 OKFHMN_11195 radA DNA repair protein RadA cofit 81 99
o Escherichia coli ECRC101 MCAODC_01710 radA DNA repair protein RadA insig. 81 99
o Escherichia coli ECRC102 NIAGMN_09045 radA DNA repair protein RadA cofit 81 99
o Escherichia coli ECRC62 BNILDI_08075 radA DNA repair protein RadA insig. 81 99
o Escherichia coli ECRC98 JDDGAC_14790 radA DNA repair protein RadA insig. 81 99
o Escherichia coli ECRC99 KEDOAH_16960 radA DNA repair protein RadA no data 81 99
o Klebsiella michiganensis M5al BWI76_RS04165 DNA repair protein RadA insig. 80 100
o Klebsiella pneumoniae MKP103 KDGMDA_12435 DNA repair protein RadA sig. 80 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS10955 radA;go_function=damaged DNA repair protein RadA insig. 80 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1057 DNA repair protein RadA insig. 80 99
o Enterobacter asburiae PDN3 EX28DRAFT_3597 DNA repair protein RadA insig. 79 100
o Enterobacter sp. TBS_079 MPMX20_00694 DNA repair protein RadA insig. 79 100
o Erwinia amylovora T8 OLJFJH_01590 DNA repair protein RadA insig. 78 99
o Rahnella sp. WP5 EX31_RS04030 DNA repair protein RadA insig. 79 99
o Pantoea sp. MT58 IAI47_16345 DNA repair protein RadA insig. 77 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06365 radA DNA repair protein RadA cofit 77 99
o Erwinia tracheiphila SCR3 LU632_RS02550 radA DNA repair protein RadA insig. 77 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21755 DNA repair protein RadA cofit 77 99
o Serratia liquefaciens MT49 IAI46_02945 DNA repair protein RadA insig. 78 99
o Pectobacterium carotovorum WPP14 HER17_RS19085 DNA repair protein RadA cofit 77 100
o Dickeya dadantii 3937 DDA3937_RS02420 DNA repair protein RadA insig. 77 100
o Dickeya dianthicola ME23 DZA65_RS02485 DNA repair protein RadA insig. 77 100
o Dickeya dianthicola 67-19 HGI48_RS02380 DNA repair protein RadA insig. 77 100
o Shewanella sp. ANA-3 Shewana3_1049 DNA repair protein RadA (RefSeq) insig. 73 99
o Alteromonas macleodii MIT1002 MIT1002_02706 Lon protease 2 insig. 71 100
o Shewanella oneidensis MR-1 SO1226 radA DNA repair protein RadA (NCBI ptt file) strong 73 99
o Shewanella amazonensis SB2B Sama_0981 DNA repair protein RadA (RefSeq) strong 74 99
o Marinobacter adhaerens HP15 HP15_487 DNA repair protein RadA strong 69 100
o Pseudomonas aeruginosa MRSN321 DY961_RS23385 radA;go_function=ATP DNA repair protein RadA insig. 61 100
o Pseudomonas aeruginosa PA14 IKLFDK_00465 DNA repair protein RadA sig. 61 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS55850 radA;go_function=ATP DNA repair protein RadA sig. 61 100
o Pseudomonas sp. DMC3 GFF3954 DNA repair protein RadA cofit 61 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1442 DNA repair protein RadA insig. 61 100
o Pseudomonas fluorescens SBW25 PFLU_RS26230 DNA repair protein RadA insig. 61 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26230 DNA repair protein RadA insig. 61 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05014 DNA repair protein RadA cofit 61 100
o Pseudomonas sp. RS175 PFR28_03792 DNA repair protein RadA insig. 61 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2768 DNA repair protein RadA sig. 61 100
o Pseudomonas orientalis W4I3 QF045_RS26600 DNA repair protein RadA insig. 61 100
o Pseudomonas simiae WCS417 PS417_24305 DNA repair protein RadA strong 61 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5076 DNA repair protein RadA strong 61 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15680 DNA repair protein RadA strong 61 100
o Pseudomonas fluorescens FW300-N2E3 AO353_13980 DNA repair protein RadA strong 60 100
o Pseudomonas syringae pv. syringae B728a Psyr_4275 DNA replication and repair protein RadA insig. 60 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4275 DNA replication and repair protein RadA insig. 60 100
o Pseudomonas sp. S08-1 OH686_16185 DNA repair protein RadA insig. 60 100
o Pseudomonas sp. BP01 JOY50_RS15685 radA DNA repair protein RadA insig. 60 100
o Pseudomonas putida KT2440 PP_4644 DNA repair enzyme insig. 60 100
o Pseudomonas sp. SVBP6 COO64_RS02920 radA DNA repair protein RadA insig. 60 100
o Pseudomonas stutzeri RCH2 Psest_3401 DNA repair protein RadA strong 60 100
o Pseudomonas segetis P6 ACVTMO_RS19740 radA DNA repair protein RadA insig. 60 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3812.1 DNA repair protein RadA insig. 59 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07420 DNA repair protein RadA insig. 59 99
o Rhodanobacter sp. FW510-T8 OKGIIK_09580 radA DNA repair protein RadA insig. 59 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0877 DNA replication and repair protein RadA strong 57 99
o Rhodanobacter denitrificans MT42 LRK55_RS02280 DNA repair protein RadA cofit 59 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02525 DNA repair protein RadA insig. 59 99
o Acinetobacter baumannii LAC-4 RR41_RS04415 DNA repair protein RadA insig. 57 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08845 DNA repair protein RadA strong 60 99
o Lysobacter sp. OAE881 ABIE51_RS07685 DNA repair protein RadA insig. 58 98
o Acinetobacter radioresistens SK82 MPMX26_02235 DNA repair protein RadA insig. 56 99
o Methylophilus sp. DMC18 GFF1046 DNA repair protein RadA insig. 57 99
o Cupriavidus basilensis FW507-4G11 RR42_RS12030 DNA repair protein RadA no data 58 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS06320 DNA repair protein RadA cofit 56 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS11670 DNA repair protein RadA insig. 56 99
o Paraburkholderia graminis OAS925 ABIE53_002526 DNA repair protein RadA/Sms sig. 56 99
o Burkholderia phytofirmans PsJN BPHYT_RS12235 DNA repair protein RadA strong 55 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00210 DNA repair protein RadA insig. 57 99
o Ralstonia solanacearum UW163 UW163_RS13540 DNA repair protein RadA insig. 57 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00590 DNA replication and repair protein RadA insig. 55 99
o Ralstonia solanacearum GMI1000 RS_RS06880 DNA repair protein RadA strong 56 99
o Ralstonia solanacearum PSI07 RPSI07_RS17270 DNA repair protein RadA strong 56 99
o Herbaspirillum seropedicae SmR1 HSERO_RS10745 DNA repair protein RadA strong 55 100
o Acidovorax sp. GW101-3H11 Ac3H11_3371 DNA repair protein RadA strong 56 99
o Castellaniella sp019104865 MT123 ABCV34_RS02345 DNA repair protein RadA sig. 53 99
o Variovorax sp. SCN45 GFF5087 DNA repair protein RadA insig. 53 99
o Variovorax sp. OAS795 ABID97_RS03770 DNA repair protein RadA insig. 53 99
o Dechlorosoma suillum PS Dsui_2413 DNA repair protein RadA cofit 55 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1833 DNA repair protein RadA insig. 54 99
o Bosea sp. OAE506 ABIE41_RS17800 DNA repair protein RadA strong 49 93
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1031 DNA repair protein RadA strong 47 93
o Azospirillum brasilense Sp245 AZOBR_RS08320 DNA repair protein RadA strong 47 99
o Synechocystis sp000284455 PCC 6803 SGL_RS11815 DNA repair protein RadA insig. 45 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17125 DNA repair protein RadA cofit 43 99
o Rhodopseudomonas palustris CGA009 TX73_015980 DNA repair protein RadA insig. 48 93
o Magnetospirillum magneticum AMB-1 AMB_RS10555 DNA repair protein RadA insig. 48 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS08395 DNA repair protein RadA cofit 44 99
o Dinoroseobacter shibae DFL-12 Dshi_2129 DNA repair protein RadA (RefSeq) strong 46 99
o Xanthobacter sp. DMC5 GFF1870 DNA repair protein RadA insig. 47 99
o Phaeobacter inhibens DSM 17395 PGA1_c10840 DNA repair protein RadA strong 48 93
o Rhizobium sp. OAE497 ABIE40_RS06280 DNA repair protein RadA insig. 43 99
o Synechococcus elongatus PCC 7942 Synpcc7942_1452 radA DNA repair protein RadA sig. 48 93
o Sphingobium sp. HT1-2 GFF1895 DNA repair protein RadA cofit 46 99
o Azospirillum sp. SherDot2 MPMX19_00904 DNA repair protein RadA sig. 47 96
o Sinorhizobium meliloti 1021 SMc00556 DNA repair protein RadA strong 44 95
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14715 DNA repair protein RadA sig. 42 99
o Agrobacterium fabrum C58 Atu1077 DNA repair protein strong 44 95
o Phocaeicola dorei CL03T12C01 ABI39_RS10420 DNA repair protein RadA insig. 42 99
o Bacteroides thetaiotaomicron VPI-5482 BT2406 putative DNA repair protein (NCBI ptt file) strong 42 99
o Bacteroides ovatus ATCC 8483 BACOVA_03019 DNA repair protein RadA cofit 42 99
o Shewanella loihica PV-4 Shew_2807 DNA repair protein RadA (RefSeq) strong 44 99
o Bacteroides stercoris CC31F HMPREF1181_RS00075 DNA repair protein RadA insig. 42 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20495 DNA repair protein RadA insig. 41 97
o Caulobacter crescentus NA1000 CCNA_01732 DNA repair protein RadA strong 45 99
o Caulobacter crescentus NA1000 Δfur CCNA_01732 DNA repair protein RadA cofit 45 99
o Rhodospirillum rubrum S1H Rru_A0406 DNA repair protein RadA (NCBI) strong 45 99
o Cellulophaga baltica 18 M666_RS03595 DNA repair protein RadA insig. 42 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22660 DNA repair protein RadA sig. 42 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0751 DNA repair protein RadA strong 44 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03745 DNA repair protein RadA insig. 43 99
o Bifidobacterium breve UCC2003 BBR_RS18740 DNA repair protein RadA strong 36 99
o Desulfovibrio vulgaris Miyazaki F DvMF_0471 DNA repair protein RadA (RefSeq) sig. 41 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU1590 radA DNA repair protein RadA (TIGR) insig. 43 93
o Fusobacterium nucleatum SB010 HUW76_02270 DNA repair protein RadA strong 38 93
o Mycobacterium tuberculosis H37Rv Rv3585 DNA repair protein RadA (DNA repair protein SMS) sig. 39 93
  Enterobacter asburiae PDN3 EX28DRAFT_2531 endopeptidase La strong 30 22
  Enterobacter sp. TBS_079 MPMX20_01030 Lon protease strong 30 22
  Erwinia amylovora T8 OLJFJH_17960 endopeptidase La strong 30 22
  Pseudomonas stutzeri RCH2 Psest_1407 RecA-superfamily ATPases implicated in signal transduction sig. 28 30
  Klebsiella michiganensis M5al BWI76_RS06535 endopeptidase La strong 30 22
  Escherichia coli BL21 ECD_00391 DNA-binding ATP-dependent protease La insig. 29 22
  Escherichia coli ECOR27 NOLOHH_01255 lon_P403L Lon protease strong 29 22
  Escherichia coli ECOR38 HEPCGN_06935 lon_P403L Lon protease strong 29 22
  Escherichia coli ECRC100 OKFHMN_08320 Lon protease strong 29 22
  Escherichia coli ECRC101 MCAODC_27545 Lon protease strong 29 22
  Escherichia coli ECRC102 NIAGMN_06375 Lon protease no data 29 22
  Escherichia coli ECRC62 BNILDI_22670 lon_P403L Lon protease strong 29 22
  Escherichia coli ECRC98 JDDGAC_11975 Lon protease sig. 29 22
  Escherichia coli ECRC99 KEDOAH_19645 Lon protease no data 29 22
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03234 Lon protease sig. 29 22
  Escherichia coli Nissle 1917 ECOLIN_RS02635 endopeptidase La strong 29 22
  Escherichia coli BW25113 b0439 lon DNA-binding ATP-dependent protease La (NCBI) strong 29 22
  Methanococcus maripaludis JJ MMJJ_RS08245 ATP-dependent protease LonB no data 29 24
  Methanococcus maripaludis S2 MMP_RS06110 ATP-dependent protease LonB strong 29 24
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01737 circadian clock protein KaiC insig. 28 31
  Pseudomonas sp. DMC3 GFF3552 Circadian clock protein kinase KaiC insig. 24 32
  Kangiella aquimarina DSM 16071 B158DRAFT_1038 ATP-dependent protease La cofit 30 22
  Pantoea sp. MT58 IAI47_14645 endopeptidase La no data 29 22
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10550 endopeptidase La no data 29 22
  Escherichia fergusonii Becca EFB2_03618 Lon protease sig. 29 22
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I strong 29 22
  Pectobacterium carotovorum WPP14 HER17_RS15840 endopeptidase La no data 29 22
  Synechocystis sp000284455 PCC 6803 SGL_RS08835 circadian clock protein KaiC sig. 27 31
  Rhizobium sp. OAE497 ABIE40_RS28915 ATPase domain-containing protein cofit 45 13
  Serratia liquefaciens MT49 IAI46_05020 endopeptidase La strong 28 22
  Klebsiella pneumoniae MKP103 KDGMDA_14620 Lon protease sig. 29 22
  Klebsiella pneumoniae MRSN742743 KFA93_RS03665 lon;go_function=ATP-dependent endopeptidase La strong 29 22
  Dickeya dadantii 3937 DDA3937_RS05650 endopeptidase La insig. 29 22
  Paraburkholderia graminis OAS925 ABIE53_004941 circadian clock protein KaiC sig. 28 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03889 circadian clock protein KaiC insig. 27 33
  Lysobacter sp. OAE881 ABIE51_RS14145 endopeptidase La sig. 30 24
  Bosea sp. OAE506 ABIE41_RS18050 endopeptidase La no data 29 22
  Shewanella amazonensis SB2B Sama_1226 endopeptidase La (RefSeq) strong 29 22
  Synechocystis sp000284455 PCC 6803 SGL_RS12430 circadian clock protein KaiC sig. 30 31
  Rahnella sp. WP5 EX31_RS22255 endopeptidase La cofit 29 22
  Dickeya dianthicola 67-19 HGI48_RS05695 endopeptidase La cofit 29 22
  Dickeya dianthicola ME23 DZA65_RS06020 endopeptidase La strong 29 22
  Sinorhizobium meliloti 1021 SMc01905 ATP-dependent protease LA protein no data 29 22
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01737 circadian clock protein KaiC insig. 27 33
  Pseudomonas sp. RS175 PFR28_01469 Circadian clock protein kinase KaiC sig. 25 42
  Agrobacterium fabrum C58 Atu5086 hypothetical protein insig. 28 40
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16450 lon endopeptidase La no data 30 20
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I cofit 30 23
  Erwinia tracheiphila SCR3 LU632_RS18335 lon endopeptidase La no data 30 20
  Bosea sp. OAE506 ABIE41_RS07035 ATPase domain-containing protein insig. 30 36
  Burkholderia phytofirmans PsJN BPHYT_RS32765 circadian clock protein KaiC insig. 26 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS39485 gas vesicle protein GvpD insig. 33 24
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1735 Mg chelatase-related protein insig. 32 24
  Synechococcus elongatus PCC 7942 Synpcc7942_1391 comM Mg chelatase-related protein insig. 28 24
  Azospirillum sp. SherDot2 MPMX19_03580 Circadian clock protein kinase KaiC insig. 26 36
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01555 KaiC 1 insig. 25 37
  Desulfovibrio vulgaris Hildenborough JW710 DVU1191 lon ATP-dependent protease La, putative (TIGR) strong 25 22
  Variovorax sp. OAS795 ABID97_RS10010 ATPase domain-containing protein insig. 29 31
  Sinorhizobium meliloti 1021 SMa2061 hypothetical protein insig. 28 37
  Pseudomonas sp. SVBP6 COO64_RS23035 ATPase domain-containing protein insig. 25 31
  Rhodopseudomonas palustris CGA009 TX73_000045 circadian clock protein KaiC insig. 25 40
  Agrobacterium fabrum C58 Atu1261 ATP-dependent protease LA no data 30 21
  Variovorax sp. SCN45 GFF1414 Circadian clock protein KaiC insig. 28 32
  Shewanella sp. ANA-3 Shewana3_2659 Lon-A peptidase (RefSeq) no data 29 22
  Alteromonas macleodii MIT1002 MIT1002_02757 Lon protease strong 29 22
  Shewanella oneidensis MR-1 SO1796 lon ATP-dependent protease La (NCBI ptt file) strong 29 22
  Pseudomonas syringae pv. syringae B728a Psyr_3944 ATP dependent PIM1 peptidase, Serine peptidase, MEROPS family S16 insig. 29 25
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3944 ATP dependent PIM1 peptidase, Serine peptidase, MEROPS family S16 insig. 29 25
  Xanthobacter sp. DMC5 GFF1156 Lon protease no data 27 22
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4861 KaiC insig. 27 37
  Synechocystis sp000284455 PCC 6803 SGL_RS17760 circadian clock protein KaiC strong 26 45
  Xanthobacter sp. DMC5 GFF2697 Circadian clock protein kinase KaiC insig. 25 36
  Mycobacterium tuberculosis H37Rv Rv0058 Probable replicative DNA helicase DnaB no data 38 14
  Mycobacterium tuberculosis H37Rv Rv2897c Conserved hypothetical protein insig. 30 17
  Vibrio cholerae E7946 ATCC 55056 CSW01_09605 endopeptidase La cofit 28 22
  Sphingobium sp. HT1-2 GFF1674 ATP-dependent protease La (EC 3.4.21.53) Type I no data 27 22
  Pseudomonas syringae pv. syringae B728a Psyr_2451 KaiC insig. 28 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2451 KaiC insig. 28 37
  Variovorax sp. OAS795 ABID97_RS10010 ATPase domain-containing protein insig. 37 16
  Herbaspirillum seropedicae SmR1 HSERO_RS12905 peptidase no data 33 17
  Pseudomonas sp. SVBP6 COO64_RS16640 lon endopeptidase La insig. 28 25
  Rhodanobacter sp. FW510-T8 OKGIIK_08030 lon endopeptidase La strong 27 21
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3054 KaiC insig. 26 37
  Pseudomonas syringae pv. syringae B728a Psyr_2451 KaiC insig. 23 32
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2451 KaiC insig. 23 32
  Rhizobium sp. OAE497 ABIE40_RS07100 endopeptidase La no data 29 21
  Rhizobium sp. OAE497 ABIE40_RS27365 ATPase domain-containing protein cofit 29 24
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16185 endopeptidase La insig. 29 24
  Pseudomonas sp. BP01 JOY50_RS04050 ATPase domain-containing protein insig. 46 10
  Pseudomonas fluorescens SBW25 PFLU_RS21045 AAA family ATPase insig. 40 14
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21045 AAA family ATPase insig. 40 14
  Shewanella loihica PV-4 Shew_2506 ATP-dependent protease La (RefSeq) no data 34 17
  Paraburkholderia graminis OAS925 ABIE53_002117 ATP-dependent Lon protease strong 33 17
  Ralstonia solanacearum GMI1000 RS_RS08655 endopeptidase La no data 30 21
  Ralstonia sp. UNC404CL21Col ABZR87_RS12785 endopeptidase La strong 29 20