Homologs of Atu0688 from Agrobacterium fabrum C58

cytidine and deoxycytidylate deaminase
SEED: tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu0688 cytidine and deoxycytidylate deaminase no data 100 100
o Sinorhizobium meliloti 1021 SMc00905 deaminase no data 75 98
o Rhizobium sp. OAE497 ABIE40_RS03755 nucleoside deaminase no data 81 93
o Bosea sp. OAE506 ABIE41_RS23205 nucleoside deaminase no data 70 93
o Azospirillum sp. SherDot2 MPMX19_01628 tRNA-specific adenosine deaminase no data 68 85
o Azospirillum brasilense Sp245 AZOBR_RS04485 CMP deaminase no data 60 98
o Rhodopseudomonas palustris CGA009 TX73_005975 nucleoside deaminase no data 69 84
o Magnetospirillum magneticum AMB-1 AMB_RS01205 nucleoside deaminase no data 62 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1445 Cytosine/adenosine deaminases no data 61 84
o Phaeobacter inhibens DSM 17395 PGA1_c22010 tRNA-specific adenosine deaminase TadA no data 59 96
o Rhodospirillum rubrum S1H Rru_A0650 Cytidine/deoxycytidylate deaminase, zinc-binding region (NCBI) no data 55 84
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04195 tRNA adenosine(34) deaminase TadA no data 53 84
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04785 nucleoside deaminase strong 46 95
o Phocaeicola dorei CL03T12C01 ABI39_RS09515 nucleoside deaminase strong 43 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13910 nucleoside deaminase strong 43 98
  Herbaspirillum seropedicae SmR1 HSERO_RS11045 zinc-binding protein no data 46 93
o Caulobacter crescentus NA1000 CCNA_00231 tRNA-specific adenosine deaminase no data 56 84
o Caulobacter crescentus NA1000 Δfur CCNA_00231 tRNA-specific adenosine deaminase no data 56 84
o Bacteroides ovatus ATCC 8483 BACOVA_03112 cytidine and deoxycytidylate deaminase zinc-binding region no data 44 98
o Bacteroides thetaiotaomicron VPI-5482 BT2234 putative cytosine/adenosine deaminase (NCBI ptt file) no data 45 95
o Rhodanobacter denitrificans MT42 LRK55_RS18110 tRNA adenosine(34) deaminase TadA no data 46 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00115 tRNA adenosine(34) deaminase TadA no data 46 97
o Pseudomonas fluorescens SBW25 PFLU_RS05285 tRNA adenosine(34) deaminase TadA no data 46 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05285 tRNA adenosine(34) deaminase TadA no data 46 94
o Dinoroseobacter shibae DFL-12 Dshi_2789 CMP/dCMP deaminase zinc-binding (RefSeq) no data 59 84
o Dechlorosoma suillum PS Dsui_2661 cytosine/adenosine deaminase no data 45 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05355 tRNA adenosine(34) deaminase TadA no data 48 94
o Desulfovibrio vulgaris Hildenborough JW710 DVU1528 cytidine/deoxycytidylate deaminase family protein (TIGR) no data 47 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_04455 tRNA adenosine(34) deaminase TadA no data 46 97
o Bacteroides stercoris CC31F HMPREF1181_RS09385 nucleoside deaminase strong 45 95
o Lysobacter sp. OAE881 ABIE51_RS09500 tRNA adenosine(34) deaminase TadA no data 48 95
o Serratia liquefaciens MT49 IAI46_19485 tRNA adenosine(34) deaminase TadA no data 47 95
o Rahnella sp. WP5 EX31_RS21885 tRNA adenosine(34) deaminase TadA no data 44 98
o Rhodanobacter sp. FW510-T8 OKGIIK_07085 tadA tRNA adenosine(34) deaminase TadA no data 49 84
o Pseudomonas fluorescens FW300-N2E3 AO353_16010 zinc-binding protein no data 47 84
o Pantoea sp. MT58 IAI47_04920 tRNA adenosine(34) deaminase TadA no data 45 95
o Pseudomonas fluorescens FW300-N2C3 AO356_06455 zinc-binding protein no data 47 84
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3159 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) no data 47 84
o Pseudomonas stutzeri RCH2 Psest_1289 Cytosine/adenosine deaminases no data 46 84
o Pseudomonas sp. RS175 PFR28_00317 tRNA-specific adenosine deaminase no data 47 84
  Acidovorax sp. GW101-3H11 Ac3H11_554 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) / domain of unknown function no data 46 95
o Marinobacter adhaerens HP15 HP15_2049 cytidine/deoxycytidylate deaminase family protein no data 44 94
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1592 Cytosine/adenosine deaminases strong 44 95
o Pseudomonas simiae WCS417 PS417_05215 zinc-binding protein no data 46 84
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20765 nucleoside deaminase no data 42 95
o Cupriavidus basilensis FW507-4G11 RR42_RS11380 hypothetical protein no data 42 94
o Dickeya dadantii 3937 DDA3937_RS15665 tRNA adenosine(34) deaminase TadA no data 43 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS12155 tRNA adenosine(34) deaminase TadA no data 40 95
o Pseudomonas syringae pv. syringae B728a Psyr_1267 tRNA-adenosine deaminase no data 46 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1267 tRNA-adenosine deaminase no data 46 84
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4813 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) no data 46 84
o Erwinia tracheiphila SCR3 LU632_RS17985 tadA tRNA adenosine(34) deaminase TadA no data 45 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14320 tRNA-specific adenosine deaminase insig. 42 93
o Dickeya dianthicola ME23 DZA65_RS16840 tRNA adenosine(34) deaminase TadA no data 43 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS06995 tRNA adenosine(34) deaminase TadA no data 49 82
  Shewanella amazonensis SB2B Sama_2352 cytidine/deoxycytidylate deaminase family protein (RefSeq) no data 47 95
o Dickeya dianthicola 67-19 HGI48_RS15760 tRNA adenosine(34) deaminase TadA no data 43 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00625 tRNA adenosine(34) deaminase TadA no data 41 95
  Ralstonia solanacearum UW163 UW163_RS13955 tRNA adenosine(34) deaminase TadA no data 41 95
o Pectobacterium carotovorum WPP14 HER17_RS05900 tRNA adenosine(34) deaminase TadA no data 44 95
o Escherichia coli ECOR27 NOLOHH_13135 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC62 BNILDI_11935 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01148 tRNA-specific adenosine deaminase no data 42 95
o Escherichia coli BW25113 b2559 tadA tRNA-specific adenosine deaminase (RefSeq) no data 42 95
  Alteromonas macleodii MIT1002 MIT1002_01024 tRNA-specific adenosine deaminase no data 41 97
  Ralstonia solanacearum PSI07 RPSI07_RS16880 tRNA adenosine(34) deaminase TadA no data 40 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19700 tRNA-specific adenosine deaminase no data 39 97
o Escherichia coli BL21 ECD_02453 tRNA-specific adenosine deaminase no data 42 95
o Paraburkholderia graminis OAS925 ABIE53_002397 tRNA(adenine34) deaminase no data 48 80
o Escherichia fergusonii Becca EFB2_01337 tRNA-specific adenosine deaminase no data 42 95
o Escherichia coli ECOR38 HEPCGN_20605 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC101 OKFHMN_21460 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC101 MCAODC_11990 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC102 NIAGMN_19230 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC98 JDDGAC_25125 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli ECRC99 KEDOAH_06760 tadA tRNA adenosine(34) deaminase TadA no data 42 95
o Escherichia coli Nissle 1917 ECOLIN_RS14480 tRNA adenosine(34) deaminase TadA no data 42 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05153 tRNA(adenine34) deaminase no data 48 80
  Ralstonia solanacearum GMI1000 RS_RS07305 tRNA adenosine(34) deaminase TadA no data 40 95
  Klebsiella michiganensis M5al BWI76_RS21280 tRNA adenosine(34) deaminase TadA no data 42 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2462 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) no data 43 93
o Acinetobacter radioresistens SK82 MPMX26_01233 tRNA-specific adenosine deaminase no data 40 95
o Kangiella aquimarina DSM 16071 B158DRAFT_1160 tRNA-adenosine deaminase (EC 3.5.4.-) no data 40 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4700 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) / domain of unknown function insig. 48 84
  Shewanella sp. ANA-3 Shewana3_1238 tRNA-adenosine deaminase (RefSeq) no data 40 95
o Pseudomonas sp. S08-1 OH686_17620 tRNA-specific adenosine-34 deaminase no data 46 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_827 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) no data 47 83
o Enterobacter sp. TBS_079 MPMX20_03428 tRNA-specific adenosine deaminase no data 42 97
o Synechococcus elongatus PCC 7942 Synpcc7942_1856 cumB tRNA-adenosine deaminase no data 42 94
o Enterobacter asburiae PDN3 EX28DRAFT_0089 Cytosine/adenosine deaminases no data 41 95
o Pseudomonas putida KT2440 PP_1035 tRNA-specific adenosine deaminase monomer no data 45 83
  Shewanella oneidensis MR-1 SO3291 cytidine/deoxycytidylate deaminase family protein (NCBI ptt file) no data 42 95
o Shewanella loihica PV-4 Shew_1299 CMP/dCMP deaminase, zinc-binding (RefSeq) no data 43 94
  Variovorax sp. SCN45 GFF187 tRNA-specific adenosine-34 deaminase (EC 3.5.4.33) / Domain of unknown function no data 45 83
  Variovorax sp. OAS795 ABID97_RS16325 tRNA adenosine(34) deaminase TadA no data 44 84
o Desulfovibrio vulgaris Miyazaki F DvMF_0169 CMP/dCMP deaminase zinc-binding (RefSeq) no data 44 84
  Burkholderia phytofirmans PsJN BPHYT_RS11580 CMP deaminase no data 49 80
o Bifidobacterium breve UCC2003 BBR_RS20205 nucleoside deaminase no data 41 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2409.1 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) no data 40 95
o Mycobacterium tuberculosis H37Rv Rv3752c Possible cytidine/deoxycytidylate deaminase no data 44 87