Homologs of rnhB from Shewanella sp. ANA-3

rnhB: ribonuclease HII (RefSeq)
SEED: Ribonuclease HII (EC 3.1.26.4)
KEGG: ribonuclease HII

127 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_2801 rnhB ribonuclease HII (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO1643 rnhB ribonuclease HII (NCBI ptt file) insig. 93 100
o Shewanella loihica PV-4 Shew_2621 ribonuclease H (RefSeq) insig. 69 100
o Shewanella amazonensis SB2B Sama_1153 rnhB ribonuclease HII (RefSeq) insig. 71 100
o Enterobacter asburiae PDN3 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) insig. 72 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_11440 ribonuclease HII cofit 71 90
o Enterobacter sp. TBS_079 MPMX20_00867 Ribonuclease HII insig. 72 91
o Alteromonas macleodii MIT1002 MIT1002_01017 Ribonuclease HII insig. 71 91
o Escherichia coli ECOR27 NOLOHH_02485 rnhB ribonuclease HII sig. 70 91
o Escherichia coli ECRC62 BNILDI_09185 rnhB ribonuclease HII cofit 70 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03480 Ribonuclease HII cofit 70 91
o Escherichia coli BW25113 b0183 rnhB ribonuclease HII (NCBI) insig. 70 91
o Escherichia fergusonii Becca EFB2_03861 Ribonuclease HII insig. 71 91
o Klebsiella pneumoniae MKP103 KDGMDA_13530 lipid-A-disaccharide synthase no data 69 91
o Klebsiella pneumoniae MRSN742743 GJGHJB_04084 lpxB lipid-A-disaccharide synthase sig. 69 91
o Klebsiella michiganensis M5al BWI76_RS05285 ribonuclease HII no data 71 90
o Escherichia coli ECOR38 HEPCGN_08095 rnhB ribonuclease HII insig. 70 91
o Escherichia coli ECRC100 OKFHMN_10140 rnhB ribonuclease HII cofit 70 91
o Escherichia coli ECRC101 MCAODC_00655 rnhB ribonuclease HII insig. 70 91
o Escherichia coli ECRC102 NIAGMN_07990 rnhB ribonuclease HII insig. 70 91
o Escherichia coli ECRC98 JDDGAC_13735 rnhB ribonuclease HII insig. 70 91
o Escherichia coli ECRC99 KEDOAH_18015 rnhB ribonuclease HII no data 70 91
o Escherichia coli BL21 ECD_00181 ribonuclease HII insig. 70 91
o Escherichia coli Nissle 1917 ECOLIN_RS00995 ribonuclease HII no data 70 91
o Erwinia amylovora T8 OLJFJH_00560 ribonuclease HII insig. 69 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF39 Ribonuclease HII (EC 3.1.26.4) insig. 69 91
o Pantoea sp. MT58 IAI47_15460 ribonuclease HII insig. 67 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS15775 rnhB ribonuclease HII cofit 67 91
o Rahnella sp. WP5 EX31_RS12965 ribonuclease HII insig. 68 90
o Serratia liquefaciens MT49 IAI46_20190 ribonuclease HII insig. 67 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_15250 rnhB ribonuclease HII cofit 67 89
o Dickeya dadantii 3937 DDA3937_RS05185 ribonuclease HII insig. 67 90
o Erwinia tracheiphila SCR3 LU632_RS19895 rnhB ribonuclease HII no data 66 90
o Pseudomonas stutzeri RCH2 Psest_2828 Ribonuclease HII no data 64 91
o Dickeya dianthicola 67-19 HGI48_RS05185 ribonuclease HII no data 66 90
o Dickeya dianthicola ME23 DZA65_RS05525 ribonuclease HII no data 66 90
o Pectobacterium carotovorum WPP14 HER17_RS16265 ribonuclease HII insig. 66 90
o Acinetobacter baumannii LAC-4 RR41_RS09985 ribonuclease HII insig. 66 90
o Pseudomonas fluorescens SBW25 PFLU_RS06345 ribonuclease HII insig. 63 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06345 ribonuclease HII sig. 63 91
o Pseudomonas orientalis W4I3 QF045_RS09125 ribonuclease HII insig. 60 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01426 Ribonuclease HII cofit 63 91
o Pseudomonas simiae WCS417 PS417_06280 ribonuclease HII insig. 63 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3098 Ribonuclease HII (EC 3.1.26.4) insig. 63 89
o Pseudomonas fluorescens FW300-N2C3 AO356_05970 ribonuclease HII insig. 63 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4694 Ribonuclease HII (EC 3.1.26.4) no data 64 89
o Pseudomonas sp. SVBP6 COO64_RS19710 rnhB ribonuclease HII insig. 63 91
o Pseudomonas protegens RBAN4 FABNJH_06150 rnhB ribonuclease HII insig. 63 91
o Pseudomonas sp. RS175 PFR28_00410 Ribonuclease HII no data 62 89
o Pseudomonas fluorescens FW300-N2E3 AO353_16530 ribonuclease HII insig. 63 89
o Pseudomonas segetis P6 ACVTMO_RS17060 rnhB ribonuclease HII insig. 65 90
o Pseudomonas putida KT2440 PP_1605 Ribonuclease HII insig. 64 91
o Pseudomonas aeruginosa PA14 IKLFDK_18595 ribonuclease HII sig. 64 91
o Pseudomonas sp. S08-1 OH686_06415 Ribonuclease HII no data 62 91
o Pseudomonas aeruginosa MRSN321 PFGADD_01326 rnhB ribonuclease HII insig. 63 91
o Pseudomonas aeruginosa PUPa3 NPBIFN_01345 rnhB ribonuclease HII insig. 63 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3055 Ribonuclease HII (EC 3.1.26.4) insig. 62 89
o Pseudomonas sp. BP01 JOY50_RS23670 rnhB ribonuclease HII insig. 63 91
o Pseudomonas sp. DMC3 GFF2067 Ribonuclease HII insig. 62 89
o Acinetobacter radioresistens SK82 MPMX26_01083 Ribonuclease HII insig. 64 90
o Pseudomonas syringae pv. syringae B728a Psyr_1357 RNase HII insig. 61 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1357 RNase HII insig. 61 92
o Marinobacter adhaerens HP15 HP15_1180 ribonuclease HII insig. 60 93
o Kangiella aquimarina DSM 16071 B158DRAFT_1094 RNase HII (EC 3.1.26.4) insig. 58 92
o Dechlorosoma suillum PS Dsui_2680 ribonuclease HII insig. 61 90
  Ralstonia solanacearum GMI1000 RS_RS07115 ribonuclease HII no data 57 91
  Ralstonia solanacearum PSI07 RPSI07_RS17030 ribonuclease HII insig. 56 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00445 ribonuclease HII no data 56 91
  Ralstonia solanacearum UW163 UW163_RS13775 ribonuclease HII no data 56 91
  Cupriavidus basilensis FW507-4G11 RR42_RS11805 ribonuclease HII insig. 58 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS11895 ribonuclease HII insig. 56 91
o Rhodanobacter sp. FW510-T8 OKGIIK_10205 rnhB ribonuclease HII insig. 58 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4901 Ribonuclease HII (EC 3.1.26.4) insig. 58 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00624 RNase HII insig. 55 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS06490 ribonuclease HII sig. 55 89
  Paraburkholderia graminis OAS925 ABIE53_002489 ribonuclease HII sig. 52 96
  Burkholderia phytofirmans PsJN BPHYT_RS12070 ribonuclease HII insig. 54 89
o Herbaspirillum seropedicae SmR1 HSERO_RS10945 ribonuclease HII insig. 52 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21650 ribonuclease HII insig. 55 91
o Variovorax sp. OAS795 ABID97_RS17100 ribonuclease HII insig. 54 99
o Methylophilus sp. DMC18 GFF1013 Ribonuclease HII insig. 52 90
o Acidovorax sp. GW101-3H11 Ac3H11_432 Ribonuclease HII (EC 3.1.26.4) insig. 59 87
  Variovorax sp. SCN45 GFF379 Ribonuclease HII (EC 3.1.26.4) insig. 56 89
o Castellaniella sp019104865 MT123 ABCV34_RS04040 ribonuclease HII insig. 53 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06640 ribonuclease HII insig. 54 91
o Rhodanobacter denitrificans MT42 LRK55_RS03070 ribonuclease HII insig. 56 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03320 ribonuclease HII insig. 56 91
o Sphingobium sp. HT1-2 GFF2572 Ribonuclease HII (EC 3.1.26.4) cofit 54 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3570.1 Ribonuclease HII (EC 3.1.26.4) insig. 49 96
o Phaeobacter inhibens DSM 17395 PGA1_c33580 ribonuclease HII insig. 52 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09510 ribonuclease HII insig. 52 92
o Caulobacter crescentus NA1000 CCNA_00383 ribonuclease HII insig. 54 89
o Caulobacter crescentus NA1000 Δfur CCNA_00383 ribonuclease HII cofit 54 89
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS11835 ribonuclease HII insig. 49 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1962 RNase HII (EC 3.1.26.4) insig. 52 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00195 ribonuclease HII insig. 49 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU0834 rnhB ribonuclease HII (TIGR) insig. 48 89
o Agrobacterium fabrum C58 Atu0720 ribonuclease HII insig. 49 89
o Sinorhizobium meliloti 1021 SMc00867 ribonuclease HII no data 52 89
o Lysobacter sp. OAE881 ABIE51_RS06875 ribonuclease HII insig. 50 89
o Bacteroides thetaiotaomicron VPI-5482 BT3412 ribonuclease HII (NCBI ptt file) sig. 50 87
o Azospirillum brasilense Sp245 AZOBR_RS20300 ribonuclease HII insig. 49 95
o Dinoroseobacter shibae DFL-12 Dshi_0023 Ribonuclease H (RefSeq) insig. 47 95
  Mycobacterium tuberculosis H37Rv Rv2902c Probable ribonuclease HII protein RnhB (RNase HII) insig. 51 89
o Bosea sp. OAE506 ABIE41_RS22855 ribonuclease HII no data 54 93
  Rhizobium sp. OAE497 ABIE40_RS05340 ribonuclease HII insig. 48 89
o Magnetospirillum magneticum AMB-1 AMB_RS20190 ribonuclease HII insig. 48 89
o Bacteroides ovatus ATCC 8483 BACOVA_01892 ribonuclease HII insig. 48 87
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12265 ribonuclease HII sig. 48 87
o Synechococcus elongatus PCC 7942 Synpcc7942_0879 rhnB RNase HII insig. 47 94
o Bacteroides stercoris CC31F HMPREF1181_RS02630 ribonuclease HII insig. 49 86
o Phocaeicola dorei CL03T12C01 ABI39_RS04525 ribonuclease HII insig. 47 87
o Fusobacterium nucleatum SB010 HUW76_08570 ribonuclease HII cofit 49 87
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23950 ribonuclease HII insig. 44 91
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2417 Ribonuclease HII insig. 49 91
o Rhodospirillum rubrum S1H Rru_A3209 Ribonuclease H (NCBI) no data 46 97
o Cellulophaga baltica 18 M666_RS01835 ribonuclease HII insig. 45 89
o Azospirillum sp. SherDot2 MPMX19_05650 Ribonuclease HII insig. 47 92
  Rhodopseudomonas palustris CGA009 TX73_005315 ribonuclease HII insig. 49 91
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22230 ribonuclease HII insig. 41 91
  Synechocystis sp000284455 PCC 6803 SGL_RS02285 ribonuclease HII insig. 38 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2882 Ribonuclease H (RefSeq) insig. 50 35
  Bifidobacterium breve UCC2003 BBR_RS12455 ribonuclease HII insig. 30 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2882 Ribonuclease H (RefSeq) insig. 47 39
  Methanococcus maripaludis JJ MMJJ_RS07270 ribonuclease HII insig. 31 90
  Methanococcus maripaludis S2 MMP_RS07085 ribonuclease HII insig. 30 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS19315 aldo/keto reductase family oxidoreductase cofit 29 48