Homologs of rpsC from Shewanella loihica PV-4

rpsC: 30S ribosomal protein S3 (RefSeq)
SEED: SSU ribosomal protein S3p (S3e)
KEGG: small subunit ribosomal protein S3

125 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0164 rpsC 30S ribosomal protein S3 (RefSeq) no data 100 100
o Shewanella amazonensis SB2B Sama_0219 rpsC 30S ribosomal protein S3 (RefSeq) no data 90 100
o Shewanella sp. ANA-3 Shewana3_0205 rpsC 30S ribosomal protein S3 (RefSeq) no data 89 100
o Shewanella oneidensis MR-1 SO0237 rpsC ribosomal protein S3 (NCBI ptt file) no data 89 100
o Pantoea sp. MT58 IAI47_02145 30S ribosomal protein S3 no data 79 99
o Alteromonas macleodii MIT1002 MIT1002_00390 30S ribosomal protein S3 no data 79 99
o Pectobacterium carotovorum WPP14 HER17_RS02095 30S ribosomal protein S3 no data 79 99
o Rahnella sp. WP5 EX31_RS16110 30S ribosomal protein S3 no data 79 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02160 rpsC 30S ribosomal protein S3 no data 78 99
o Serratia liquefaciens MT49 IAI46_23405 30S ribosomal protein S3 no data 79 99
o Erwinia amylovora T8 OLJFJH_03855 30S ribosomal protein S3 no data 78 99
o Klebsiella pneumoniae MKP103 KDGMDA_06670 30S ribosomal protein S3 no data 78 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS24895 rpsC;go_function=structural 30S ribosomal protein S3 no data 78 99
o Klebsiella michiganensis M5al BWI76_RS25810 30S ribosomal protein S3 no data 78 99
o Escherichia coli BL21 ECD_03165 30S ribosomal subunit protein S3 no data 78 99
o Escherichia fergusonii Becca EFB2_00509 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECOR27 NOLOHH_09190 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECOR38 HEPCGN_16220 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC100 OKFHMN_17390 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC101 MCAODC_07920 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC102 NIAGMN_15160 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC62 BNILDI_02330 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC98 JDDGAC_21020 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli ECRC99 KEDOAH_10750 rpsC 30S ribosomal protein S3 no data 78 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00389 30S ribosomal protein S3 no data 78 99
o Escherichia coli Nissle 1917 ECOLIN_RS19005 30S ribosomal protein S3 no data 78 99
o Enterobacter asburiae PDN3 EX28DRAFT_0012 SSU ribosomal protein S3P no data 78 99
o Enterobacter sp. TBS_079 MPMX20_04221 30S ribosomal protein S3 no data 78 99
o Escherichia coli BW25113 b3314 rpsC 30S ribosomal protein S3 (NCBI) no data 78 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2366 SSU ribosomal protein S3p (S3e) no data 78 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12295 rpsC 30S ribosomal protein S3 no data 78 99
o Erwinia tracheiphila SCR3 LU632_RS22625 rpsC 30S ribosomal protein S3 no data 78 99
o Dickeya dadantii 3937 DDA3937_RS19255 30S ribosomal protein S3 no data 78 99
o Dickeya dianthicola ME23 DZA65_RS20475 30S ribosomal protein S3 no data 78 99
o Dickeya dianthicola 67-19 HGI48_RS19355 30S ribosomal protein S3 no data 78 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_13110 30S ribosomal protein S3 no data 77 100
o Pseudomonas aeruginosa MRSN321 DY961_RS29520 rpsC;go_component=plastid 30S ribosomal protein S3 no data 71 98
o Pseudomonas aeruginosa PA14 IKLFDK_21910 30S ribosomal protein S3 no data 71 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS43845 rpsC;go_component=plastid 30S ribosomal protein S3 no data 71 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21875 30S ribosomal protein S3 no data 71 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1882 ribosomal protein S3, bacterial type no data 69 99
o Marinobacter adhaerens HP15 HP15_386 30S ribosomal protein S3 no data 73 92
o Pseudomonas sp. S08-1 OH686_15385 ribosomal protein S3 no data 71 98
o Pseudomonas stutzeri RCH2 Psest_3600 ribosomal protein S3, bacterial type no data 71 98
o Pseudomonas putida KT2440 PP_0460 30S ribosomal subunit protein S3 no data 70 98
o Pseudomonas sp. BP01 JOY50_RS20420 rpsC 30S ribosomal protein S3 no data 70 98
o Pseudomonas sp. SVBP6 COO64_RS16190 rpsC 30S ribosomal protein S3 no data 70 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4137.1 SSU ribosomal protein S3p (S3e) no data 69 100
o Pseudomonas protegens RBAN4 FABNJH_28065 rpsC 30S ribosomal protein S3 no data 70 98
o Pseudomonas segetis P6 ACVTMO_RS04670 rpsC 30S ribosomal protein S3 no data 70 98
o Pseudomonas fluorescens SBW25 PFLU_RS27135 30S ribosomal protein S3 no data 70 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27135 30S ribosomal protein S3 no data 70 98
o Pseudomonas sp. DMC3 GFF3770 30S ribosomal protein S3 no data 70 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05216 30S ribosomal protein S3 no data 70 98
o Pseudomonas orientalis W4I3 QF045_RS27530 30S ribosomal protein S3 no data 70 98
o Pseudomonas syringae pv. syringae B728a Psyr_4542 SSU ribosomal protein S3P no data 70 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4542 SSU ribosomal protein S3P no data 70 98
o Pseudomonas simiae WCS417 PS417_25505 30S ribosomal protein S3 no data 70 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2588 SSU ribosomal protein S3p (S3e) no data 70 98
o Pseudomonas fluorescens FW300-N2E3 AO353_06970 30S ribosomal protein S3 no data 70 98
o Pseudomonas fluorescens FW300-N2C3 AO356_14675 30S ribosomal protein S3 no data 70 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4865 SSU ribosomal protein S3p (S3e) no data 70 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1260 SSU ribosomal protein S3p (S3e) no data 70 98
o Pseudomonas sp. RS175 PFR28_03996 30S ribosomal protein S3 no data 69 98
o Lysobacter sp. OAE881 ABIE51_RS05870 30S ribosomal protein S3 no data 69 97
o Rhodanobacter sp. FW510-T8 OKGIIK_10435 rpsC 30S ribosomal protein S3 no data 69 98
o Rhodanobacter denitrificans MT42 LRK55_RS03295 30S ribosomal protein S3 no data 68 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03545 30S ribosomal protein S3 no data 68 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06400 30S ribosomal protein S3 no data 72 91
o Acinetobacter radioresistens SK82 MPMX26_02715 30S ribosomal protein S3 no data 64 100
  Variovorax sp. OAS795 ABID97_RS00625 30S ribosomal protein S3 no data 64 96
  Acidovorax sp. GW101-3H11 Ac3H11_2129 SSU ribosomal protein S3p (S3e) no data 64 96
o Rhodospirillum rubrum S1H Rru_A2682 ribosomal protein S3 (NCBI) no data 66 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2915 SSU ribosomal protein S3p (S3e) no data 64 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS02810 30S ribosomal protein S3 no data 62 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07160 30S ribosomal protein S3 no data 62 98
o Ralstonia solanacearum GMI1000 RS_RS15095 30S ribosomal protein S3 no data 62 98
o Ralstonia solanacearum PSI07 RPSI07_RS10085 30S ribosomal protein S3 no data 62 98
o Ralstonia solanacearum UW163 UW163_RS06460 30S ribosomal protein S3 no data 62 98
o Magnetospirillum magneticum AMB-1 AMB_RS15740 30S ribosomal protein S3 no data 66 98
  Variovorax sp. SCN45 GFF3641 SSU ribosomal protein S3p (S3e) no data 65 94
o Methylophilus sp. DMC18 GFF1602 30S ribosomal protein S3 no data 62 100
o Herbaspirillum seropedicae SmR1 HSERO_RS00600 30S ribosomal protein S3 no data 63 99
o Dechlorosoma suillum PS Dsui_0353 ribosomal protein S3, bacterial type no data 61 99
o Azospirillum brasilense Sp245 AZOBR_RS11440 30S ribosomal protein S3 no data 65 98
o Azospirillum sp. SherDot2 MPMX19_00398 30S ribosomal protein S3 no data 65 98
o Burkholderia phytofirmans PsJN BPHYT_RS18085 30S ribosomal protein S3 no data 61 99
o Paraburkholderia graminis OAS925 ABIE53_003780 small subunit ribosomal protein S3 no data 61 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05574 SSU ribosomal protein S3P no data 61 99
o Cupriavidus basilensis FW507-4G11 RR42_RS19225 30S ribosomal protein S3 no data 63 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS28235 30S ribosomal protein S3 no data 61 99
o Agrobacterium fabrum C58 Atu1940 30S ribosomal protein S3 no data 61 100
o Rhodopseudomonas palustris CGA009 TX73_016775 30S ribosomal protein S3 no data 64 100
o Xanthobacter sp. DMC5 GFF1373 30S ribosomal protein S3 no data 64 98
o Rhizobium sp. OAE497 ABIE40_RS07885 30S ribosomal protein S3 no data 64 91
o Sinorhizobium meliloti 1021 SMc01303 30S ribosomal protein S3 no data 64 91
o Bosea sp. OAE506 ABIE41_RS14580 30S ribosomal protein S3 no data 64 98
o Castellaniella sp019104865 MT123 ABCV34_RS11440 30S ribosomal protein S3 no data 61 93
o Dinoroseobacter shibae DFL-12 Dshi_0288 ribosomal protein S3 (RefSeq) no data 63 91
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3735 SSU ribosomal protein S3P no data 64 91
o Phaeobacter inhibens DSM 17395 PGA1_c01620 30S ribosomal protein S3 no data 60 99
o Caulobacter crescentus NA1000 CCNA_01312 SSU ribosomal protein S3P no data 64 95
o Caulobacter crescentus NA1000 Δfur CCNA_01312 SSU ribosomal protein S3P no data 64 95
o Sphingobium sp. HT1-2 GFF3155 SSU ribosomal protein S3p (S3e) no data 63 91
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03940 30S ribosomal protein S3 no data 62 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0249 ribosomal protein S3, bacterial type no data 59 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19375 30S ribosomal protein S3 no data 59 90
o Desulfovibrio vulgaris Miyazaki F DvMF_0085 rpsC 30S ribosomal protein S3 (RefSeq) no data 59 93
o Desulfovibrio vulgaris Hildenborough JW710 DVU1309 rpsC ribosomal protein S3 (TIGR) no data 59 93
  Mycobacterium tuberculosis H37Rv Rv0707 30S ribosomal protein S3 RpsC no data 55 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16895 30S ribosomal protein S3 no data 59 90
o Bacteroides ovatus ATCC 8483 BACOVA_01021 ribosomal protein S3 no data 55 91
o Bacteroides thetaiotaomicron VPI-5482 BT2721 30S ribosomal protein S3 (NCBI ptt file) no data 55 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00480 30S ribosomal protein S3 no data 58 90
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16950 30S ribosomal protein S3 no data 52 98
o Bacteroides stercoris CC31F HMPREF1181_RS00495 30S ribosomal protein S3 no data 55 90
o Phocaeicola dorei CL03T12C01 ABI39_RS03700 30S ribosomal protein S3 no data 56 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09315 30S ribosomal protein S3 no data 56 90
o Bifidobacterium breve UCC2003 BBR_RS18905 30S ribosomal protein S3 no data 53 97
o Cellulophaga baltica 18 M666_RS00985 30S ribosomal protein S3 no data 55 90
o Fusobacterium nucleatum SB010 HUW76_09175 30S ribosomal protein S3 no data 51 91
o Synechocystis sp000284455 PCC 6803 SGL_RS05820 30S ribosomal protein S3 no data 55 99
o Synechococcus elongatus PCC 7942 Synpcc7942_2226 rpsC 30S ribosomal protein S3 no data 49 92
  Methanococcus maripaludis JJ MMJJ_RS07130 30S ribosomal protein S3 no data 31 76
  Methanococcus maripaludis S2 MMP_RS07225 30S ribosomal protein S3 no data 31 76