Homologs of BT2827 from Bacteroides thetaiotaomicron VPI-5482

DNA topoisomerase I (NCBI ptt file)
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT2827 DNA topoisomerase I (NCBI ptt file) no data 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_02074 DNA topoisomerase I no data 91 100
o Bacteroides stercoris CC31F HMPREF1181_RS01095 type I DNA topoisomerase strong 79 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12100 type I DNA topoisomerase no data 74 98
o Phocaeicola dorei CL03T12C01 ABI39_RS04700 type I DNA topoisomerase strong 74 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS11640 type I DNA topoisomerase no data 68 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05015 type I DNA topoisomerase no data 62 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07630 DNA topoisomerase I no data 60 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3133 DNA topoisomerase I, bacterial no data 58 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07115 DNA topoisomerase I no data 60 95
o Lysobacter sp. OAE881 ABIE51_RS02220 DNA topoisomerase I strong 45 100
o Rhodanobacter denitrificans MT42 LRK55_RS09790 DNA topoisomerase I no data 45 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10150 DNA topoisomerase I strong 45 98
o Rhodanobacter sp. FW510-T8 OKGIIK_13765 topA DNA topoisomerase I no data 45 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13865 DNA topoisomerase I sig. 44 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4752.1 DNA topoisomerase I (EC 5.99.1.2) insig. 44 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04230 type I DNA topoisomerase no data 38 96
o Phaeobacter inhibens DSM 17395 PGA1_c06220 DNA topoisomerase TopA no data 37 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2450 DNA topoisomerase I, bacterial no data 38 97
o Sinorhizobium meliloti 1021 SMc01364 DNA topoisomerase I insig. 36 100
o Rhizobium sp. OAE497 ABIE40_RS07355 type I DNA topoisomerase sig. 37 97
o Agrobacterium fabrum C58 Atu1304 DNA topoisomerase I no data 37 97
o Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 36 97
o Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 36 97
o Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 38 97
o Synechococcus elongatus PCC 7942 Synpcc7942_1416 topA DNA topoisomerase I no data 38 96
o Rhodospirillum rubrum S1H Rru_A3202 DNA topoisomerase (NCBI) strong 38 99
o Bosea sp. OAE506 ABIE41_RS17240 type I DNA topoisomerase no data 36 97
o Dinoroseobacter shibae DFL-12 Dshi_1137 DNA topoisomerase I (RefSeq) no data 38 94
o Azospirillum sp. SherDot2 MPMX19_01509 DNA topoisomerase 1 no data 37 97
o Mycobacterium tuberculosis H37Rv Rv3646c DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I) no data 38 94
o Magnetospirillum magneticum AMB-1 AMB_RS03505 type I DNA topoisomerase no data 38 95
o Azospirillum brasilense Sp245 AZOBR_RS15890 DNA topoisomerase I strong 37 97
o Bifidobacterium breve UCC2003 BBR_RS11185 type I DNA topoisomerase sig. 37 94
  Marinobacter adhaerens HP15 HP15_1514 DNA topoisomerase I no data 42 75
  Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 41 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_08695 DNA topoisomerase 1 no data 40 78
  Alteromonas macleodii MIT1002 MIT1002_01705 DNA topoisomerase 1 no data 42 74
  Kangiella aquimarina DSM 16071 B158DRAFT_2227 DNA topoisomerase I, bacterial strong 42 74
  Pseudomonas fluorescens FW300-N2E3 AO353_00495 DNA topoisomerase I strong 39 78
  Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 39 80
  Shewanella amazonensis SB2B Sama_1322 DNA topoisomerase I (RefSeq) no data 41 74
  Pseudomonas stutzeri RCH2 Psest_2651 DNA topoisomerase I, bacterial strong 39 78
  Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 39 80
  Pseudomonas putida KT2440 PP_2139 DNA topoisomerase I no data 39 78
  Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 39 78
  Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 41 73
  Pseudomonas simiae WCS417 PS417_07590 DNA topoisomerase I no data 39 78
  Pseudomonas fluorescens SBW25 PFLU_RS07665 type I DNA topoisomerase strong 39 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07665 type I DNA topoisomerase strong 39 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) strong 39 78
o Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 38 91
  Pseudomonas syringae pv. syringae B728a Psyr_3287 DNA topoisomerase I strong 38 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3287 DNA topoisomerase I no data 38 78
  Dickeya dadantii 3937 DDA3937_RS10535 type I DNA topoisomerase no data 40 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4038 DNA topoisomerase I (EC 5.99.1.2) strong 39 78
  Pseudomonas sp. RS175 PFR28_01113 DNA topoisomerase 1 strong 39 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2287 DNA topoisomerase I (EC 5.99.1.2) no data 38 78
  Escherichia coli BL21 ECD_01250 DNA topoisomerase I, omega subunit strong 40 74
  Escherichia fergusonii Becca EFB2_02653 DNA topoisomerase 1 strong 40 74
  Escherichia coli ECOR27 NOLOHH_20270 type I DNA topoisomerase no data 40 74
  Escherichia coli ECRC101 OKFHMN_02605 type I DNA topoisomerase no data 40 74
  Escherichia coli ECRC101 MCAODC_15660 type I DNA topoisomerase no data 40 74
  Escherichia coli ECRC102 NIAGMN_26775 type I DNA topoisomerase no data 40 74
  Escherichia coli ECRC98 JDDGAC_05150 type I DNA topoisomerase no data 40 74
  Escherichia coli ECRC99 KEDOAH_26160 type I DNA topoisomerase no data 40 74
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02410 DNA topoisomerase 1 strong 40 74
  Escherichia coli BW25113 b1274 topA DNA topoisomerase I (NCBI) no data 40 74
  Pseudomonas fluorescens FW300-N2C3 AO356_02315 DNA topoisomerase I strong 38 78
  Escherichia coli Nissle 1917 ECOLIN_RS07675 type I DNA topoisomerase no data 40 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2714 DNA topoisomerase I (EC 5.99.1.2) no data 40 74
  Dickeya dianthicola 67-19 HGI48_RS10535 type I DNA topoisomerase no data 40 74
  Escherichia coli ECOR38 HEPCGN_25595 type I DNA topoisomerase cofit 40 74
  Escherichia coli ECRC62 BNILDI_18420 type I DNA topoisomerase no data 40 74
  Dickeya dianthicola ME23 DZA65_RS11015 type I DNA topoisomerase no data 40 74
  Enterobacter sp. TBS_079 MPMX20_02502 DNA topoisomerase 1 no data 40 74
  Enterobacter asburiae PDN3 EX28DRAFT_0945 DNA topoisomerase I, bacterial no data 40 74
  Erwinia tracheiphila SCR3 LU632_RS12555 topA type I DNA topoisomerase no data 40 74
  Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 38 78
  Rahnella sp. WP5 EX31_RS09895 type I DNA topoisomerase cofit 38 78
  Pectobacterium carotovorum WPP14 HER17_RS10875 type I DNA topoisomerase no data 39 74
  Klebsiella michiganensis M5al BWI76_RS11925 DNA topoisomerase I no data 40 73
  Pantoea sp. MT58 IAI47_09235 type I DNA topoisomerase insig. 39 74
  Serratia liquefaciens MT49 IAI46_13970 type I DNA topoisomerase sig. 39 74
o Fusobacterium nucleatum SB010 HUW76_06805 type I DNA topoisomerase no data 38 86
  Methanococcus maripaludis S2 MMP_RS04955 DNA topoisomerase I strong 27 76
  Methanococcus maripaludis JJ MMJJ_RS00180 DNA topoisomerase I strong 27 76
  Desulfovibrio vulgaris Miyazaki F DvMF_3176 DNA topoisomerase III (RefSeq) insig. 25 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01110 DNA topoisomerase 3 insig. 26 77
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09010 DNA topoisomerase III insig. 28 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07650 DNA topoisomerase III sig. 28 68
  Herbaspirillum seropedicae SmR1 HSERO_RS23390 DNA topoisomerase III no data 27 68
  Phocaeicola dorei CL03T12C01 ABI39_RS16120 type IA DNA topoisomerase insig. 27 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 26 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU2316 topB DNA topoisomerase III (TIGR) insig. 28 47
  Pseudomonas putida KT2440 PP_4019 DNA topoisomerase III insig. 27 62
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02650 DNA topoisomerase III sig. 27 61
  Pseudomonas fluorescens FW300-N2C3 AO356_00120 DNA topoisomerase III insig. 26 61
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3808 DNA topoisomerase III, bacteria and conjugative plasmid insig. 27 62
  Dechlorosoma suillum PS Dsui_2608 topoisomerase IA cofit 27 68