Homologs of topA from Desulfovibrio vulgaris Hildenborough JW710

topA: DNA topoisomerase I (TIGR)
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 78 100
o Pseudomonas stutzeri RCH2 Psest_2651 DNA topoisomerase I, bacterial strong 41 93
o Escherichia coli BL21 ECD_01250 DNA topoisomerase I, omega subunit strong 39 99
o Escherichia coli ECOR27 NOLOHH_20270 type I DNA topoisomerase no data 39 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02410 DNA topoisomerase 1 strong 39 99
o Escherichia coli BW25113 b1274 topA DNA topoisomerase I (NCBI) no data 39 99
o Escherichia fergusonii Becca EFB2_02653 DNA topoisomerase 1 strong 39 99
o Escherichia coli ECRC101 OKFHMN_02605 type I DNA topoisomerase no data 39 99
o Escherichia coli ECRC101 MCAODC_15660 type I DNA topoisomerase no data 39 99
o Escherichia coli ECRC102 NIAGMN_26775 type I DNA topoisomerase no data 39 99
o Escherichia coli ECRC98 JDDGAC_05150 type I DNA topoisomerase no data 39 99
o Escherichia coli ECRC99 KEDOAH_26160 type I DNA topoisomerase no data 39 99
o Escherichia coli Nissle 1917 ECOLIN_RS07675 type I DNA topoisomerase no data 39 99
o Escherichia coli ECOR38 HEPCGN_25595 type I DNA topoisomerase cofit 39 99
o Escherichia coli ECRC62 BNILDI_18420 type I DNA topoisomerase no data 39 99
o Enterobacter asburiae PDN3 EX28DRAFT_0945 DNA topoisomerase I, bacterial no data 40 99
o Pseudomonas syringae pv. syringae B728a Psyr_3287 DNA topoisomerase I strong 41 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3287 DNA topoisomerase I no data 41 93
o Enterobacter sp. TBS_079 MPMX20_02502 DNA topoisomerase 1 no data 40 99
o Pseudomonas putida KT2440 PP_2139 DNA topoisomerase I no data 40 93
o Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 40 93
o Pseudomonas simiae WCS417 PS417_07590 DNA topoisomerase I no data 40 93
o Alteromonas macleodii MIT1002 MIT1002_01705 DNA topoisomerase 1 no data 39 99
o Klebsiella michiganensis M5al BWI76_RS11925 DNA topoisomerase I no data 39 99
o Pseudomonas fluorescens FW300-N2E3 AO353_00495 DNA topoisomerase I strong 39 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2714 DNA topoisomerase I (EC 5.99.1.2) no data 39 99
o Pseudomonas fluorescens SBW25 PFLU_RS07665 type I DNA topoisomerase strong 40 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07665 type I DNA topoisomerase strong 40 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_08695 DNA topoisomerase 1 no data 39 99
o Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 41 93
o Dickeya dianthicola ME23 DZA65_RS11015 type I DNA topoisomerase no data 39 99
o Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 40 93
o Pseudomonas sp. RS175 PFR28_01113 DNA topoisomerase 1 strong 40 93
o Dickeya dadantii 3937 DDA3937_RS10535 type I DNA topoisomerase no data 39 99
o Erwinia tracheiphila SCR3 LU632_RS12555 topA type I DNA topoisomerase no data 39 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4038 DNA topoisomerase I (EC 5.99.1.2) strong 39 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2287 DNA topoisomerase I (EC 5.99.1.2) no data 39 93
o Rahnella sp. WP5 EX31_RS09895 type I DNA topoisomerase cofit 39 99
o Pseudomonas fluorescens FW300-N2C3 AO356_02315 DNA topoisomerase I strong 39 93
o Serratia liquefaciens MT49 IAI46_13970 type I DNA topoisomerase sig. 39 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) strong 38 99
o Dickeya dianthicola 67-19 HGI48_RS10535 type I DNA topoisomerase no data 39 99
o Shewanella amazonensis SB2B Sama_1322 DNA topoisomerase I (RefSeq) no data 38 99
o Pectobacterium carotovorum WPP14 HER17_RS10875 type I DNA topoisomerase no data 39 99
  Lysobacter sp. OAE881 ABIE51_RS02220 DNA topoisomerase I strong 47 79
o Marinobacter adhaerens HP15 HP15_1514 DNA topoisomerase I no data 38 99
o Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 40 93
o Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 38 93
o Pantoea sp. MT58 IAI47_09235 type I DNA topoisomerase insig. 39 99
  Azospirillum sp. SherDot2 MPMX19_01509 DNA topoisomerase 1 no data 42 86
  Azospirillum brasilense Sp245 AZOBR_RS15890 DNA topoisomerase I strong 43 86
o Kangiella aquimarina DSM 16071 B158DRAFT_2227 DNA topoisomerase I, bacterial strong 37 99
  Sinorhizobium meliloti 1021 SMc01364 DNA topoisomerase I insig. 42 86
  Rhodanobacter sp. FW510-T8 OKGIIK_13765 topA DNA topoisomerase I no data 45 79
  Rhizobium sp. OAE497 ABIE40_RS07355 type I DNA topoisomerase sig. 41 86
  Rhodanobacter denitrificans MT42 LRK55_RS09790 DNA topoisomerase I no data 44 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10150 DNA topoisomerase I strong 44 80
  Agrobacterium fabrum C58 Atu1304 DNA topoisomerase I no data 41 86
o Fusobacterium nucleatum SB010 HUW76_06805 type I DNA topoisomerase no data 39 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4752.1 DNA topoisomerase I (EC 5.99.1.2) insig. 44 80
  Rhodospirillum rubrum S1H Rru_A3202 DNA topoisomerase (NCBI) strong 42 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13865 DNA topoisomerase I sig. 44 79
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 42 86
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 42 86
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04230 type I DNA topoisomerase no data 42 86
  Bosea sp. OAE506 ABIE41_RS17240 type I DNA topoisomerase no data 42 80
  Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 41 86
  Magnetospirillum magneticum AMB-1 AMB_RS03505 type I DNA topoisomerase no data 41 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2450 DNA topoisomerase I, bacterial no data 42 86
o Bacteroides stercoris CC31F HMPREF1181_RS01095 type I DNA topoisomerase strong 40 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11640 type I DNA topoisomerase no data 42 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05015 type I DNA topoisomerase no data 41 80
  Bacteroides thetaiotaomicron VPI-5482 BT2827 DNA topoisomerase I (NCBI ptt file) no data 41 80
  Synechococcus elongatus PCC 7942 Synpcc7942_1416 topA DNA topoisomerase I no data 43 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12100 type I DNA topoisomerase no data 41 80
  Bacteroides ovatus ATCC 8483 BACOVA_02074 DNA topoisomerase I no data 40 80
  Phocaeicola dorei CL03T12C01 ABI39_RS04700 type I DNA topoisomerase strong 41 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07115 DNA topoisomerase I no data 41 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07630 DNA topoisomerase I no data 40 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3133 DNA topoisomerase I, bacterial no data 40 80
  Dinoroseobacter shibae DFL-12 Dshi_1137 DNA topoisomerase I (RefSeq) no data 38 88
  Phaeobacter inhibens DSM 17395 PGA1_c06220 DNA topoisomerase TopA no data 39 81
  Bifidobacterium breve UCC2003 BBR_RS11185 type I DNA topoisomerase sig. 39 81
  Mycobacterium tuberculosis H37Rv Rv3646c DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I) no data 39 86
o Methanococcus maripaludis S2 MMP_RS04955 DNA topoisomerase I strong 25 99
o Methanococcus maripaludis JJ MMJJ_RS00180 DNA topoisomerase I strong 25 99
  Phocaeicola dorei CL03T12C01 ABI39_RS16120 type IA DNA topoisomerase insig. 29 76
  Bacteroides thetaiotaomicron VPI-5482 BT0105 DNA topoisomerase I (Omega-protein) (NCBI ptt file) sig. 27 74
  Marinobacter adhaerens HP15 HP15_1186 DNA topoisomerase III insig. 27 81
  Dechlorosoma suillum PS Dsui_2608 topoisomerase IA cofit 27 94
  Bacteroides thetaiotaomicron VPI-5482 BT2324 DNA topoisomerase III (NCBI ptt file) insig. 28 91
  Desulfovibrio vulgaris Miyazaki F DvMF_3176 DNA topoisomerase III (RefSeq) insig. 27 73
  Bacteroides stercoris CC31F HMPREF1181_RS11415 type IA DNA topoisomerase insig. 27 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2568.1 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 26 80
  Castellaniella sp019104865 MT123 ABCV34_RS12290 DNA topoisomerase III no data 28 81
  Pseudomonas fluorescens FW300-N2C3 AO356_00120 DNA topoisomerase III insig. 25 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14305 DNA topoisomerase 3 insig. 27 66
  Cupriavidus basilensis FW507-4G11 RR42_RS24470 hypothetical protein insig. 27 71
  Phocaeicola dorei CL03T12C01 ABI39_RS09935 DNA topoisomerase 3 cofit 28 66