Homologs of dapF from Desulfovibrio vulgaris Hildenborough JW710

dapF: diaminopimelate epimerase (TIGR)
SEED: Diaminopimelate epimerase (EC 5.1.1.7)
KEGG: diaminopimelate epimerase

135 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1867 dapF diaminopimelate epimerase (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0561 dapF diaminopimelate epimerase (RefSeq) no data 76 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19550 diaminopimelate epimerase no data 38 93
o Synechococcus elongatus PCC 7942 Synpcc7942_1927 dapF diaminopimelate epimerase no data 36 95
o Synechocystis sp000284455 PCC 6803 SGL_RS17890 diaminopimelate epimerase no data 37 93
o Cellulophaga baltica 18 M666_RS17805 diaminopimelate epimerase no data 35 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1430 diaminopimelate epimerase no data 36 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21670 diaminopimelate epimerase no data 35 94
  Kangiella aquimarina DSM 16071 B158DRAFT_0246 diaminopimelate epimerase (EC 5.1.1.7) no data 33 94
  Bacteroides stercoris CC31F HMPREF1181_RS16035 diaminopimelate epimerase insig. 32 95
  Sphingobium sp. HT1-2 GFF316 Diaminopimelate epimerase (EC 5.1.1.7) no data 37 93
  Bacteroides ovatus ATCC 8483 BACOVA_03762 diaminopimelate epimerase strong 34 94
  Dechlorosoma suillum PS Dsui_0649 diaminopimelate epimerase no data 32 94
  Bacteroides thetaiotaomicron VPI-5482 BT0548 diaminopimelate epimerase (NCBI ptt file) cofit 35 94
  Methanococcus maripaludis JJ MMJJ_RS00375 diaminopimelate epimerase no data 31 94
  Azospirillum brasilense Sp245 AZOBR_RS14160 diaminopimelate epimerase no data 36 95
  Cupriavidus basilensis FW507-4G11 RR42_RS01250 diaminopimelate epimerase no data 33 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23025 diaminopimelate epimerase no data 33 94
  Methanococcus maripaludis S2 MMP_RS04760 diaminopimelate epimerase no data 32 94
  Phocaeicola dorei CL03T12C01 ABI39_RS14295 diaminopimelate epimerase cofit 30 95
  Marinobacter adhaerens HP15 HP15_248 diaminopimelate epimerase no data 32 95
  Acidovorax sp. GW101-3H11 Ac3H11_1993 Diaminopimelate epimerase (EC 5.1.1.7) no data 34 92
  Paraburkholderia graminis OAS925 ABIE53_000428 diaminopimelate epimerase no data 33 94
  Azospirillum sp. SherDot2 MPMX19_00602 Diaminopimelate epimerase no data 36 95
  Herbaspirillum seropedicae SmR1 HSERO_RS21455 diaminopimelate epimerase no data 33 94
  Ralstonia solanacearum PSI07 RPSI07_RS23305 diaminopimelate epimerase no data 32 96
  Pectobacterium carotovorum WPP14 HER17_RS01340 diaminopimelate epimerase no data 35 94
  Burkholderia phytofirmans PsJN BPHYT_RS01665 diaminopimelate epimerase no data 34 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10065 diaminopimelate epimerase no data 32 96
  Ralstonia solanacearum UW163 UW163_RS03515 diaminopimelate epimerase no data 32 96
  Pseudomonas stutzeri RCH2 Psest_3765 diaminopimelate epimerase no data 35 93
  Dinoroseobacter shibae DFL-12 Dshi_3228 Diaminopimelate epimerase (RefSeq) no data 35 97
  Magnetospirillum magneticum AMB-1 AMB_RS01095 diaminopimelate epimerase no data 35 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02200 diaminopimelate epimerase no data 32 94
  Pseudomonas putida KT2440 PP_5228 diaminopimelate epimerase no data 35 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS05580 diaminopimelate epimerase sig. 31 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF545 Diaminopimelate epimerase (EC 5.1.1.7) no data 34 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01230 diaminopimelate epimerase insig. 31 94
  Pseudomonas sp. BP01 JOY50_RS22600 dapF diaminopimelate epimerase no data 35 93
  Castellaniella sp019104865 MT123 ABCV34_RS13465 diaminopimelate epimerase no data 35 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS00365 diaminopimelate epimerase no data 32 94
  Shewanella loihica PV-4 Shew_0323 dapF diaminopimelate epimerase (RefSeq) no data 31 94
  Shewanella oneidensis MR-1 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) no data 31 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15015 diaminopimelate epimerase no data 35 94
  Methylophilus sp. DMC18 GFF1537 Diaminopimelate epimerase no data 34 94
  Variovorax sp. SCN45 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) no data 32 94
  Pseudomonas sp. SVBP6 COO64_RS01260 dapF diaminopimelate epimerase no data 34 93
  Phaeobacter inhibens DSM 17395 PGA1_c33950 diaminopimelate epimerase DapF no data 34 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05655 Diaminopimelate epimerase cofit 33 93
  Dickeya dianthicola ME23 DZA65_RS21100 diaminopimelate epimerase no data 32 94
  Dickeya dadantii 3937 DDA3937_RS19900 diaminopimelate epimerase no data 32 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) insig. 33 93
  Pseudomonas simiae WCS417 PS417_27585 diaminopimelate epimerase sig. 32 93
  Pseudomonas protegens RBAN4 FABNJH_30330 dapF diaminopimelate epimerase sig. 32 94
  Pseudomonas syringae pv. syringae B728a Psyr_0183 diaminopimelate epimerase no data 32 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0183 diaminopimelate epimerase no data 32 93
  Alteromonas macleodii MIT1002 MIT1002_00159 Diaminopimelate epimerase no data 31 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06915 diaminopimelate epimerase strong 31 95
  Shewanella sp. ANA-3 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) no data 30 94
  Lysobacter sp. OAE881 ABIE51_RS03025 diaminopimelate epimerase no data 35 95
  Dickeya dianthicola 67-19 HGI48_RS20055 diaminopimelate epimerase no data 32 94
  Pseudomonas sp. DMC3 GFF368 Diaminopimelate epimerase no data 33 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) sig. 33 93
  Variovorax sp. OAS795 ABID97_RS06135 diaminopimelate epimerase no data 32 94
  Pseudomonas fluorescens FW300-N2E3 AO353_09040 diaminopimelate epimerase sig. 33 94
  Escherichia coli Nissle 1917 ECOLIN_RS21865 diaminopimelate epimerase no data 32 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_00640 diaminopimelate epimerase no data 31 93
  Escherichia coli BL21 ECD_03685 diaminopimelate epimerase strong 31 94
  Escherichia fergusonii Becca EFB2_04828 Diaminopimelate epimerase no data 31 94
  Escherichia coli ECOR27 NOLOHH_06560 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECOR38 HEPCGN_13135 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC100 OKFHMN_14430 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC101 MCAODC_04935 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC102 NIAGMN_12185 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC62 BNILDI_04975 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC98 JDDGAC_18055 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli ECRC99 KEDOAH_13720 dapF diaminopimelate epimerase no data 31 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04241 Diaminopimelate epimerase no data 31 94
  Escherichia coli BW25113 b3809 dapF diaminopimelate epimerase (VIMSS) no data 31 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02325 diaminopimelate epimerase no data 34 93
  Pseudomonas fluorescens FW300-N2C3 AO356_12735 diaminopimelate epimerase sig. 33 93
  Klebsiella pneumoniae MKP103 KDGMDA_09690 diaminopimelate epimerase strong 31 94
  Klebsiella pneumoniae MRSN742743 KFA93_RS23125 dapF;go_function=diaminopimelate diaminopimelate epimerase strong 31 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) no data 30 94
  Pseudomonas sp. S08-1 OH686_13795 diaminopimelate epimerase no data 32 93
  Pseudomonas segetis P6 ACVTMO_RS22515 dapF diaminopimelate epimerase no data 31 94
  Enterobacter sp. TBS_079 MPMX20_04467 Diaminopimelate epimerase strong 31 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) strong 33 93
  Enterobacter asburiae PDN3 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) strong 31 94
  Pseudomonas sp. RS175 PFR28_04376 Diaminopimelate epimerase no data 33 93
  Pseudomonas orientalis W4I3 QF045_RS01950 diaminopimelate epimerase no data 32 93
  Acinetobacter baumannii LAC-4 RR41_RS04440 diaminopimelate epimerase no data 35 93
  Pseudomonas fluorescens SBW25 PFLU_RS29270 diaminopimelate epimerase sig. 31 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29270 diaminopimelate epimerase no data 31 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.845.1 Diaminopimelate epimerase (EC 5.1.1.7) no data 36 94
  Ralstonia solanacearum GMI1000 RS_RS00675 diaminopimelate epimerase no data 32 96
  Erwinia amylovora T8 OLJFJH_06405 diaminopimelate epimerase no data 31 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13290 diaminopimelate epimerase no data 33 91
  Rahnella sp. WP5 EX31_RS15155 diaminopimelate epimerase insig. 32 94
  Serratia liquefaciens MT49 IAI46_00715 diaminopimelate epimerase no data 32 94
  Rhodospirillum rubrum S1H Rru_A1183 Diaminopimelate epimerase (NCBI) no data 34 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08790 dapF diaminopimelate epimerase no data 28 94
  Erwinia tracheiphila SCR3 LU632_RS24145 dapF diaminopimelate epimerase no data 28 94
  Caulobacter crescentus NA1000 CCNA_03800 diaminopimelate epimerase no data 33 94
  Caulobacter crescentus NA1000 Δfur CCNA_03800 diaminopimelate epimerase no data 33 94
  Pseudomonas fluorescens SBW25 PFLU_RS17335 diaminopimelate epimerase insig. 31 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17335 diaminopimelate epimerase sig. 31 94
  Pseudomonas aeruginosa PA14 IKLFDK_27060 diaminopimelate epimerase no data 31 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS49850 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 31 93
  Pseudomonas aeruginosa MRSN321 DY961_RS12275 dapF;go_function=diaminopimelate diaminopimelate epimerase no data 30 93
  Pantoea sp. MT58 IAI47_18410 diaminopimelate epimerase strong 29 94
  Pseudomonas putida KT2440 PP_3790 diaminopimelate epimerase strong 33 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS18670 dapF diaminopimelate epimerase cofit 30 94
  Rhodanobacter sp. FW510-T8 OKGIIK_15335 dapF diaminopimelate epimerase no data 32 93
  Shewanella amazonensis SB2B Sama_3249 dapF diaminopimelate epimerase (RefSeq) no data 30 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08545 diaminopimelate epimerase no data 35 93
  Klebsiella michiganensis M5al BWI76_RS01200 diaminopimelate epimerase strong 31 94
  Rhodopseudomonas palustris CGA009 TX73_001300 diaminopimelate epimerase no data 31 94
  Pseudomonas fluorescens FW300-N2C3 AO356_20725 diaminopimelate epimerase insig. 31 94
  Pseudomonas sp. SVBP6 COO64_RS23360 dapF diaminopimelate epimerase insig. 30 93
  Rhodanobacter denitrificans MT42 LRK55_RS08310 diaminopimelate epimerase no data 34 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6030 Diaminopimelate epimerase (EC 5.1.1.7) insig. 32 93
  Pseudomonas protegens RBAN4 FABNJH_13265 dapF diaminopimelate epimerase insig. 32 93
  Pseudomonas simiae WCS417 PS417_15365 diaminopimelate epimerase insig. 30 94
  Pseudomonas orientalis W4I3 QF045_RS17720 diaminopimelate epimerase cofit 29 96
  Xanthobacter sp. DMC5 GFF1769 Diaminopimelate epimerase no data 31 96
  Acinetobacter radioresistens SK82 MPMX26_02231 Diaminopimelate epimerase no data 30 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2394 diaminopimelate epimerase (EC 5.1.1.7) no data 33 85
  Mycobacterium tuberculosis H37Rv Rv2726c Probable diaminopimelate epimerase DapF (DAP epimerase) no data 32 93
  Rhizobium sp. OAE497 ABIE40_RS18325 diaminopimelate epimerase no data 30 95
  Bifidobacterium breve UCC2003 BBR_RS13700 diaminopimelate epimerase strong 32 91
  Bosea sp. OAE506 ABIE41_RS11700 diaminopimelate epimerase no data 29 94
  Rahnella sp. WP5 EX31_RS10160 diaminopimelate epimerase insig. 32 85
  Agrobacterium fabrum C58 Atu2695 diaminopimelate epimerase no data 29 95
  Sinorhizobium meliloti 1021 SMc03856 diaminopimelate epimerase no data 27 95