Homologs of rnc from Desulfovibrio vulgaris Hildenborough JW710

rnc: ribonuclease III (TIGR)
SEED: Ribonuclease III (EC 3.1.26.3)
KEGG: ribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1440 rnc ribonuclease III (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0243 rnc ribonuclease III (RefSeq) no data 70 88
o Dechlorosoma suillum PS Dsui_2460 ribonuclease III no data 44 89
o Kangiella aquimarina DSM 16071 B158DRAFT_2187 ribonuclease III, bacterial sig. 41 88
o Shewanella amazonensis SB2B Sama_0880 rnc ribonuclease III (RefSeq) no data 39 90
o Alteromonas macleodii MIT1002 MIT1002_02713 Ribonuclease 3 no data 42 87
o Bosea sp. OAE506 ABIE41_RS19930 ribonuclease III no data 43 84
o Shewanella sp. ANA-3 Shewana3_3026 rnc ribonuclease III (RefSeq) no data 38 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS10205 ribonuclease III no data 40 87
o Shewanella oneidensis MR-1 SO1348 rnc ribonuclease III (NCBI ptt file) no data 37 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3673.1 Ribonuclease III (EC 3.1.26.3) no data 42 86
  Herbaspirillum seropedicae SmR1 HSERO_RS09660 ribonuclease III strong 41 86
o Vibrio cholerae E7946 ATCC 55056 CSW01_12455 ribonuclease 3 no data 40 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14485 ribonuclease III no data 40 87
o Ralstonia solanacearum UW163 UW163_RS11950 ribonuclease III no data 40 87
o Shewanella loihica PV-4 Shew_1054 ribonuclease III (RefSeq) no data 38 90
o Ralstonia solanacearum PSI07 RPSI07_RS18975 ribonuclease III no data 39 87
o Marinobacter adhaerens HP15 HP15_784 ribonuclease 3 insig. 38 88
o Variovorax sp. OAS795 ABID97_RS08365 ribonuclease III strong 42 83
o Acidovorax sp. GW101-3H11 Ac3H11_1566 Ribonuclease III (EC 3.1.26.3) no data 40 83
o Cupriavidus basilensis FW507-4G11 RR42_RS14040 ribonuclease III no data 41 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS04610 ribonuclease III insig. 42 78
o Ralstonia solanacearum GMI1000 RS_RS05265 ribonuclease 3 no data 39 87
  Paraburkholderia graminis OAS925 ABIE53_003036 ribonuclease-3 sig. 42 78
o Lysobacter sp. OAE881 ABIE51_RS13860 ribonuclease III no data 44 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04362 RNAse III (EC 3.1.26.3) insig. 42 78
o Fusobacterium nucleatum SB010 HUW76_02250 ribonuclease III no data 36 79
  Burkholderia phytofirmans PsJN BPHYT_RS14370 ribonuclease III insig. 43 74
o Pseudomonas putida KT2440 PP_1433 Ribonuclease 3 no data 42 87
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3346 Ribonuclease III (EC 3.1.26.3) no data 41 83
o Pseudomonas syringae pv. syringae B728a Psyr_3951 RNAse III no data 43 76
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3951 RNAse III no data 43 76
o Variovorax sp. SCN45 GFF3870 Ribonuclease III (EC 3.1.26.3) strong 41 83
o Pseudomonas simiae WCS417 PS417_05190 ribonuclease III no data 44 74
o Pseudomonas fluorescens SBW25 PFLU_RS05260 ribonuclease III no data 44 74
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05260 ribonuclease III no data 44 74
o Pseudomonas fluorescens FW300-N2E3 AO353_04510 ribonuclease III no data 43 74
o Pseudomonas stutzeri RCH2 Psest_3092 ribonuclease III, bacterial strong 40 83
o Mycobacterium tuberculosis H37Rv Rv2925c Probable ribonuclease III Rnc (RNase III) no data 42 76
o Castellaniella sp019104865 MT123 ABCV34_RS08325 ribonuclease III no data 41 75
o Dickeya dadantii 3937 DDA3937_RS15735 ribonuclease III no data 38 75
o Bifidobacterium breve UCC2003 BBR_RS12355 ribonuclease III strong 38 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5426 Ribonuclease III (EC 3.1.26.3) no data 40 83
o Dickeya dianthicola ME23 DZA65_RS16900 ribonuclease III no data 38 75
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2475 Ribonuclease III (EC 3.1.26.3) strong 37 80
  Rhodopseudomonas palustris CGA009 TX73_013975 ribonuclease III insig. 41 86
o Pseudomonas fluorescens FW300-N2C3 AO356_17495 ribonuclease III no data 40 83
o Enterobacter sp. TBS_079 MPMX20_03438 Ribonuclease 3 no data 37 80
o Dickeya dianthicola 67-19 HGI48_RS15820 ribonuclease III no data 38 75
o Methanococcus maripaludis S2 MMP_RS07840 ribonuclease III sig. 34 90
o Pectobacterium carotovorum WPP14 HER17_RS05815 ribonuclease III no data 37 75
o Magnetospirillum magneticum AMB-1 AMB_RS11425 ribonuclease III cofit 40 85
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07150 ribonuclease III no data 39 84
o Escherichia coli BL21 ECD_02461 RNase III no data 38 75
o Escherichia fergusonii Becca EFB2_01329 Ribonuclease 3 no data 38 75
o Escherichia coli ECOR27 NOLOHH_13085 rnc ribonuclease III no data 38 75
o Escherichia coli ECOR38 HEPCGN_20555 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC101 OKFHMN_21410 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC101 MCAODC_11940 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC102 NIAGMN_19180 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC62 BNILDI_11885 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC98 JDDGAC_25075 rnc ribonuclease III no data 38 75
o Escherichia coli ECRC99 KEDOAH_06810 rnc ribonuclease III no data 38 75
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01140 Ribonuclease 3 no data 38 75
o Escherichia coli Nissle 1917 ECOLIN_RS14530 ribonuclease III no data 38 75
o Escherichia coli BW25113 b2567 rnc ribonuclease III (NCBI) strong 38 75
o Enterobacter asburiae PDN3 EX28DRAFT_0079 ribonuclease III, bacterial no data 37 76
o Methanococcus maripaludis JJ MMJJ_RS06515 ribonuclease III insig. 34 90
o Rhodospirillum rubrum S1H Rru_A1852 Ribonuclease III (NCBI) no data 40 87
o Phaeobacter inhibens DSM 17395 PGA1_c01060 ribonuclease 3 sig. 38 86
o Pantoea sp. MT58 IAI47_04880 ribonuclease III no data 37 76
o Rhodanobacter denitrificans MT42 LRK55_RS16685 ribonuclease III strong 42 82
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16970 ribonuclease III strong 42 82
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05535 ribonuclease III no data 40 85
o Klebsiella michiganensis M5al BWI76_RS21320 ribonuclease 3 no data 37 75
o Pseudomonas sp. S08-1 OH686_20080 ribonuclease III no data 42 77
o Erwinia tracheiphila SCR3 LU632_RS15385 rnc ribonuclease III insig. 37 75
o Rhodanobacter sp. FW510-T8 OKGIIK_07870 rnc ribonuclease III cofit 41 83
o Acinetobacter radioresistens SK82 MPMX26_02156 Ribonuclease 3 no data 35 86
o Azospirillum brasilense Sp245 AZOBR_RS22070 ribonuclease III no data 39 85
o Dinoroseobacter shibae DFL-12 Dshi_0200 Ribonuclease III (RefSeq) no data 39 83
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4840 Ribonuclease III (EC 3.1.26.3) no data 42 78
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_892 Ribonuclease III (EC 3.1.26.3) no data 45 69
o Pseudomonas sp. RS175 PFR28_03523 Ribonuclease 3 no data 41 78
o Rahnella sp. WP5 EX31_RS21835 ribonuclease III no data 38 75
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2313 ribonuclease III, bacterial strong 35 93
o Serratia liquefaciens MT49 IAI46_19550 ribonuclease III no data 38 75
o Caulobacter crescentus NA1000 CCNA_01630 ribonuclease III no data 41 77
o Caulobacter crescentus NA1000 Δfur CCNA_01630 ribonuclease III no data 41 77
o Sinorhizobium meliloti 1021 SMc02652 ribonuclease III no data 37 87
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00745 ribonuclease III sig. 33 92
o Azospirillum sp. SherDot2 MPMX19_00843 Ribonuclease 3 no data 37 86
o Rhizobium sp. OAE497 ABIE40_RS06075 ribonuclease III no data 34 85
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01610 ribonuclease III cofit 33 91
o Agrobacterium fabrum C58 Atu1035 ribonuclease III no data 32 86
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18760 ribonuclease III strong 32 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10765 ribonuclease III strong 31 86
  Phocaeicola dorei CL03T12C01 ABI39_RS06330 ribonuclease III cofit 31 86
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1946 ribonuclease III, bacterial no data 34 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07075 ribonuclease III insig. 30 90