Homologs of vacB from Shewanella oneidensis MR-1

vacB: ribonuclease R (NCBI ptt file)
SEED: 3'-to-5' exoribonuclease RNase R
KEGG: ribonuclease R

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3935 vacB ribonuclease R (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_0697 RNAse R (RefSeq) strong 97 100
o Shewanella loihica PV-4 Shew_3289 ribonuclease R (RefSeq) strong 81 99
o Shewanella amazonensis SB2B Sama_3067 exoribonuclease II (RefSeq) strong 81 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_13155 ribonuclease R cofit 57 99
o Klebsiella pneumoniae MKP103 KDGMDA_11075 ribonuclease R cofit 60 93
o Klebsiella pneumoniae MRSN742743 GJGHJB_04566 rnr ribonuclease R strong 60 93
o Rahnella sp. WP5 EX31_RS08785 ribonuclease R insig. 58 96
o Pectobacterium carotovorum WPP14 HER17_RS03835 ribonuclease R cofit 57 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 strong 60 93
o Enterobacter asburiae PDN3 EX28DRAFT_3376 ribonuclease R strong 57 99
o Klebsiella michiganensis M5al BWI76_RS02575 exoribonuclease R sig. 57 100
o Enterobacter sp. TBS_079 MPMX20_00460 Ribonuclease R sig. 61 90
o Escherichia coli Nissle 1917 ECOLIN_RS24265 ribonuclease R sig. 61 90
o Escherichia fergusonii Becca EFB2_04356 Ribonuclease R insig. 61 90
o Escherichia coli ECRC101 MCAODC_02735 rnr ribonuclease R sig. 61 90
o Escherichia coli ECRC102 NIAGMN_10070 rnr ribonuclease R cofit 61 90
o Escherichia coli ECRC98 JDDGAC_15860 rnr ribonuclease R cofit 61 90
o Escherichia coli ECRC99 KEDOAH_15935 rnr ribonuclease R no data 61 90
o Escherichia coli BL21 ECD_04046 exoribonuclease R, RNase R insig. 61 90
o Escherichia coli BW25113 b4179 vacB putative enzyme (VIMSS) strong 61 90
o Escherichia coli ECRC100 OKFHMN_12220 rnr ribonuclease R cofit 61 90
o Escherichia coli ECOR27 NOLOHH_04485 rnr ribonuclease R sig. 61 90
o Escherichia coli ECRC62 BNILDI_07005 rnr ribonuclease R cofit 61 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03863 Ribonuclease R cofit 61 90
o Escherichia coli ECOR38 HEPCGN_10450 rnr ribonuclease R cofit 60 90
o Dickeya dianthicola ME23 DZA65_RS18405 ribonuclease R insig. 57 99
o Dickeya dianthicola 67-19 HGI48_RS17315 ribonuclease R cofit 57 99
o Serratia liquefaciens MT49 IAI46_01660 ribonuclease R strong 56 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_13230 rnr ribonuclease R strong 56 100
o Erwinia tracheiphila SCR3 LU632_RS21750 rnr ribonuclease R strong 56 100
o Dickeya dadantii 3937 DDA3937_RS17260 ribonuclease R sig. 59 95
o Erwinia amylovora T8 OLJFJH_02470 ribonuclease R strong 56 98
o Pantoea sp. MT58 IAI47_02625 ribonuclease R sig. 54 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02640 rnr ribonuclease R cofit 54 100
o Alteromonas macleodii MIT1002 MIT1002_03606 Ribonuclease R cofit 56 92
o Pseudomonas sp. RS175 PFR28_05130 Ribonuclease R strong 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_28865 ribonuclease R strong 54 91
o Pseudomonas aeruginosa MRSN321 PFGADD_05171 rnr ribonuclease R strong 54 91
o Pseudomonas stutzeri RCH2 Psest_0691 ribonuclease R strong 49 100
o Pseudomonas aeruginosa PUPa3 NPBIFN_05247 rnr ribonuclease R strong 54 91
o Kangiella aquimarina DSM 16071 B158DRAFT_1989 ribonuclease R cofit 51 96
o Pseudomonas sp. S08-1 OH686_15910 ribonuclease R cofit 50 97
o Pseudomonas protegens RBAN4 FABNJH_02985 rnr ribonuclease R insig. 48 100
o Pseudomonas segetis P6 ACVTMO_RS20555 rnr ribonuclease R strong 51 98
o Pseudomonas fluorescens FW300-N2C3 AO356_08610 exoribonuclease R strong 50 99
o Pseudomonas fluorescens FW300-N2E3 AO353_13200 exoribonuclease R strong 48 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R strong 49 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_144 3'-to-5' exoribonuclease RNase R strong 49 100
o Pseudomonas syringae pv. syringae B728a Psyr_0579 RNAse R strong 48 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0579 RNAse R strong 48 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R strong 50 99
o Pseudomonas sp. SVBP6 COO64_RS17955 rnr ribonuclease R insig. 49 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00747 Ribonuclease R cofit 49 100
o Pseudomonas simiae WCS417 PS417_02555 exoribonuclease R strong 48 99
o Pseudomonas orientalis W4I3 QF045_RS05605 ribonuclease R strong 48 99
o Pseudomonas putida KT2440 PP_4880 exoribonuclease R strong 48 99
o Pseudomonas sp. BP01 JOY50_RS17320 rnr ribonuclease R insig. 52 89
o Pseudomonas sp. DMC3 GFF3229 Ribonuclease R sig. 49 100
o Pseudomonas fluorescens SBW25 PFLU_RS02625 ribonuclease R cofit 52 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02625 ribonuclease R strong 52 89
o Dechlorosoma suillum PS Dsui_3128 ribonuclease R cofit 51 90
o Methylophilus sp. DMC18 GFF635 Ribonuclease R insig. 47 99
o Cupriavidus basilensis FW507-4G11 RR42_RS13065 ribonuclease R strong 49 90
o Marinobacter adhaerens HP15 HP15_622 exoribonuclease R strong 52 84
o Ralstonia solanacearum PSI07 RPSI07_RS18030 ribonuclease R strong 47 92
o Ralstonia solanacearum GMI1000 RS_RS06155 ribonuclease R strong 47 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS10985 ribonuclease R sig. 45 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15345 ribonuclease R strong 49 88
o Ralstonia solanacearum UW163 UW163_RS12810 ribonuclease R insig. 49 88
o Paraburkholderia graminis OAS925 ABIE53_001940 ribonuclease R strong 46 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS22925 ribonuclease R strong 50 89
o Burkholderia phytofirmans PsJN BPHYT_RS08455 ribonuclease R sig. 48 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00712 RNAse R strong 46 99
o Herbaspirillum seropedicae SmR1 HSERO_RS09290 ribonuclease R strong 48 89
o Rhodanobacter sp. FW510-T8 OKGIIK_06755 rnr ribonuclease R strong 48 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09655 ribonuclease R cofit 48 90
  Rhodanobacter denitrificans MT42 LRK55_RS00235 ribonuclease R strong 48 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00495 ribonuclease R strong 48 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08270 ribonuclease R strong 48 89
o Castellaniella sp019104865 MT123 ABCV34_RS06625 ribonuclease R cofit 47 88
o Acidovorax sp. GW101-3H11 Ac3H11_412 3'-to-5' exoribonuclease RNase R strong 46 89
o Variovorax sp. SCN45 GFF399 3'-to-5' exoribonuclease RNase R cofit 45 90
o Variovorax sp. OAS795 ABID97_RS17200 ribonuclease R strong 45 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4921 3'-to-5' exoribonuclease RNase R cofit 48 82
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R strong 44 92
o Lysobacter sp. OAE881 ABIE51_RS07475 ribonuclease R cofit 44 92
o Acinetobacter radioresistens SK82 MPMX26_02684 Ribonuclease R cofit 43 100
o Acinetobacter baumannii LAC-4 RR41_RS02345 ribonuclease R strong 45 92
  Desulfovibrio vulgaris Miyazaki F DvMF_0925 ribonuclease R (RefSeq) sig. 36 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU2467 rnr ribonuclease R (TIGR) insig. 36 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05885 ribonuclease R strong 34 79
  Azospirillum brasilense Sp245 AZOBR_RS16165 ribonuclease R insig. 35 86
  Magnetospirillum magneticum AMB-1 AMB_RS04465 ribonuclease R cofit 35 89
  Rhizobium sp. OAE497 ABIE40_RS07350 ribonuclease R insig. 37 86
  Rhodospirillum rubrum S1H Rru_A3203 ribonuclease R (NCBI) cofit 35 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04270 ribonuclease R strong 32 87
  Phaeobacter inhibens DSM 17395 PGA1_c36430 putative ribonuclease R strong 35 89
  Agrobacterium fabrum C58 Atu1303 exoribonuclease strong 35 91
  Rhodopseudomonas palustris CGA009 TX73_016160 ribonuclease R insig. 38 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08325 ribonuclease R cofit 39 71
  Sinorhizobium meliloti 1021 SMc01365 exoribonuclease II protein sig. 36 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10530 ribonuclease R strong 32 85
  Azospirillum sp. SherDot2 MPMX19_01812 Ribonuclease R insig. 35 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17355 ribonuclease R strong 30 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0669 ribonuclease R no data 33 80
  Phocaeicola dorei CL03T12C01 ABI39_RS06100 ribonuclease R sig. 32 80
  Caulobacter crescentus NA1000 CCNA_02537 ribonuclease R strong 37 73
  Caulobacter crescentus NA1000 Δfur CCNA_02537 ribonuclease R cofit 37 73
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10970 ribonuclease R strong 31 80
  Bacteroides stercoris CC31F HMPREF1181_RS01550 ribonuclease R insig. 32 79
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3266 ribonuclease R strong 34 92
  Bacteroides ovatus ATCC 8483 BACOVA_02736 ribonuclease R strong 31 79
  Bacteroides thetaiotaomicron VPI-5482 BT3077 ribonuclease R (NCBI ptt file) insig. 31 79
  Dinoroseobacter shibae DFL-12 Dshi_0015 ribonuclease R (RefSeq) insig. 36 86
  Xanthobacter sp. DMC5 GFF1081 Ribonuclease R insig. 35 74
  Cellulophaga baltica 18 M666_RS05085 ribonuclease R no data 31 85
  Sphingobium sp. HT1-2 GFF3533 '3'-to-5' exoribonuclease RNase R' transl_table=11 cofit 33 86
  Fusobacterium nucleatum SB010 HUW76_06085 ribonuclease R cofit 31 82
  Bosea sp. OAE506 ABIE41_RS18140 ribonuclease R insig. 36 71
  Marinobacter adhaerens HP15 HP15_3552 exoribonuclease R strong 30 79
  Erwinia amylovora T8 OLJFJH_13600 exoribonuclease II cofit 30 79
  Synechocystis sp000284455 PCC 6803 SGL_RS05500 ribonuclease R strong 26 84
  Serratia liquefaciens MT49 IAI46_13870 exoribonuclease II insig. 29 79
  Dickeya dadantii 3937 DDA3937_RS12490 exoribonuclease II strong 29 78
  Pectobacterium carotovorum WPP14 HER17_RS09430 exoribonuclease II strong 29 79
  Pantoea sp. MT58 IAI47_09320 exoribonuclease II sig. 28 78
  Synechococcus elongatus PCC 7942 Synpcc7942_1911 zam Cold shock protein strong 26 84
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09455 exoribonuclease II cofit 28 78
  Rahnella sp. WP5 EX31_RS07155 exoribonuclease II insig. 28 79
  Dickeya dianthicola 67-19 HGI48_RS12545 exoribonuclease II cofit 29 78
  Dickeya dianthicola ME23 DZA65_RS12995 exoribonuclease II sig. 28 78
  Enterobacter asburiae PDN3 EX28DRAFT_0961 exoribonuclease II cofit 28 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_18190 exoribonuclease 2 insig. 28 80
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23355 exoribonuclease II no data 28 79
  Erwinia tracheiphila SCR3 LU632_RS12255 exoribonuclease II no data 28 79
  Enterobacter sp. TBS_079 MPMX20_02487 Exoribonuclease 2 strong 27 78
  Klebsiella pneumoniae MRSN742743 GJGHJB_02919 rnb exoribonuclease II insig. 28 78
  Klebsiella pneumoniae MKP103 KDGMDA_19680 exoribonuclease II strong 28 78
  Klebsiella michiganensis M5al BWI76_RS11990 exoribonuclease II sig. 27 79
  Escherichia coli ECRC62 BNILDI_18335 rnb exoribonuclease II cofit 28 78
  Escherichia coli Nissle 1917 ECOLIN_RS07765 exoribonuclease II no data 28 78
  Escherichia coli ECRC100 OKFHMN_02520 rnb exoribonuclease II cofit 28 78
  Escherichia coli ECRC101 MCAODC_15750 rnb exoribonuclease II strong 28 78
  Escherichia coli ECRC102 NIAGMN_26690 rnb exoribonuclease II sig. 28 78
  Escherichia coli ECRC98 JDDGAC_05065 rnb exoribonuclease II sig. 28 78
  Escherichia coli ECRC99 KEDOAH_26245 rnb exoribonuclease II no data 28 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02395 Exoribonuclease 2 sig. 28 78
  Escherichia coli ECOR27 NOLOHH_20185 rnb exoribonuclease II insig. 28 78
  Escherichia coli ECOR38 HEPCGN_25680 rnb exoribonuclease II strong 28 78
  Escherichia coli BW25113 b1286 rnb exoribonuclease II (NCBI) strong 28 78
  Escherichia fergusonii Becca EFB2_02638 Exoribonuclease 2 sig. 28 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2698 Exoribonuclease II (EC 3.1.13.1) strong 28 78
  Escherichia coli BL21 ECD_01263 ribonuclease II cofit 27 78
  Variovorax sp. SCN45 GFF7962 3'-to-5' exoribonuclease RNase R no data 45 15
  Synechococcus elongatus PCC 7942 Synpcc7942_1124 rnb Exoribonuclease II strong 26 50
  Synechocystis sp000284455 PCC 6803 SGL_RS05100 ribonuclease R no data 24 49
  Desulfovibrio vulgaris Miyazaki F DvMF_1943 ribonuclease II (RefSeq) no data 25 41
  Rhodanobacter sp. FW510-T8 OKGIIK_02040 Ribonuclease II insig. 25 50
  Desulfovibrio vulgaris Hildenborough JW710 DVU3207 RNB-like family protein (TIGR) strong 27 41
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16070 RNB domain-containing ribonuclease insig. 25 49
  Rhodanobacter denitrificans MT42 LRK55_RS12180 RNB domain-containing ribonuclease insig. 26 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12440 RNB domain-containing ribonuclease insig. 26 41
  Methanococcus maripaludis S2 MMP_RS02335 DNA-directed RNA polymerase no data 48 8
  Methanococcus maripaludis JJ MMJJ_RS02940 DNA-directed RNA polymerase no data 46 8
  Synechococcus elongatus PCC 7942 Synpcc7942_1546 putative ribonuclease II strong 26 39
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1618 Exoribonuclease R insig. 24 53
  Pantoea sp. MT58 IAI47_01805 RNA-binding transcriptional accessory protein insig. 35 17
  Serratia liquefaciens MT49 IAI46_23800 RNA-binding transcriptional accessory protein insig. 36 17
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS01800 Tex family protein cofit 35 17
  Shewanella loihica PV-4 Shew_3634 RNA-binding S1 domain-containing protein (RefSeq) sig. 31 24
  Rahnella sp. WP5 EX31_RS04840 RNA-binding transcriptional accessory protein insig. 40 13
  Shewanella sp. ANA-3 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) sig. 36 15
  Dickeya dadantii 3937 DDA3937_RS19635 RNA-binding transcriptional accessory protein sig. 40 12
  Pectobacterium carotovorum WPP14 HER17_RS01615 RNA-binding transcriptional accessory protein cofit 35 13
  Klebsiella pneumoniae MRSN742743 GJGHJB_00338 yhgF Protein YhgF insig. 39 15
  Klebsiella pneumoniae MKP103 KDGMDA_06990 Protein YhgF sig. 39 15
  Klebsiella michiganensis M5al BWI76_RS26655 transcription accessory protein insig. 37 15
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11945 RNA-binding transcriptional accessory protein no data 36 14
  Erwinia tracheiphila SCR3 LU632_RS22955 RNA-binding transcriptional accessory protein insig. 36 14
  Vibrio cholerae E7946 ATCC 55056 CSW01_13705 RNA-binding transcriptional accessory protein insig. 35 13
  Dickeya dianthicola 67-19 HGI48_RS19770 RNA-binding transcriptional accessory protein insig. 35 17
  Dickeya dianthicola ME23 DZA65_RS20860 RNA-binding transcriptional accessory protein insig. 35 17
  Mycobacterium tuberculosis H37Rv Rv1630 30S ribosomal protein S1 RpsA no data 34 11
  Shewanella oneidensis MR-1 SO4629 conserved hypothetical protein (NCBI ptt file) sig. 45 10
  Enterobacter sp. TBS_079 MPMX20_04294 Protein YhgF insig. 38 13
  Paraburkholderia graminis OAS925 ABIE53_003561 exoribonuclease-2 insig. 24 41
  Shewanella amazonensis SB2B Sama_3508 hypothetical protein (RefSeq) sig. 39 15
  Escherichia coli ECRC100 OKFHMN_17025 yhgF Protein YhgF cofit 37 14
  Escherichia coli ECRC101 MCAODC_07555 yhgF Protein YhgF insig. 37 14
  Escherichia coli ECRC102 NIAGMN_14795 yhgF Protein YhgF cofit 37 14
  Escherichia coli ECRC98 JDDGAC_20655 yhgF Protein YhgF insig. 37 14
  Escherichia coli ECRC99 KEDOAH_11115 yhgF Protein YhgF no data 37 14
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06290 exoribonuclease-2 no data 24 41
  Enterobacter asburiae PDN3 EX28DRAFT_4136 Transcriptional accessory protein insig. 41 12
  Escherichia fergusonii Becca EFB2_00421 Protein YhgF insig. 40 12
  Escherichia coli ECOR27 NOLOHH_08815 yhgF Protein YhgF insig. 40 12
  Escherichia coli ECOR38 HEPCGN_15835 yhgF Protein YhgF insig. 40 12
  Escherichia coli ECRC62 BNILDI_02705 yhgF Protein YhgF cofit 40 12
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00296 Protein YhgF cofit 40 12
  Escherichia coli Nissle 1917 ECOLIN_RS19465 Tex family protein sig. 40 12
  Escherichia coli BW25113 b3407 yhgF orf, hypothetical protein (VIMSS) sig. 40 12
  Bifidobacterium breve UCC2003 BBR_RS14275 30S ribosomal protein S1 insig. 37 10
  Dechlorosoma suillum PS Dsui_2546 transcriptional accessory protein cofit 34 17
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF611 Transcription accessory protein (S1 RNA-binding domain) insig. 37 15
  Dechlorosoma suillum PS Dsui_0446 exoribonuclease R no data 24 28
  Escherichia coli BL21 ECD_03259 putative transcriptional accessory protein insig. 40 12
  Marinobacter adhaerens HP15 HP15_216 DNA damage response protein (yhgF like) (from data) sig. 36 14
  Erwinia amylovora T8 OLJFJH_04170 RNA-binding transcriptional accessory protein cofit 34 16
  Magnetospirillum magneticum AMB-1 AMB_RS17285 RNA-binding transcriptional accessory protein cofit 36 14
  Burkholderia phytofirmans PsJN BPHYT_RS16980 ribonuclease II no data 24 38
  Pseudomonas protegens RBAN4 FABNJH_01435 tex Transcriptional accessory protein Tex/SPT6 insig. 32 14
  Herbaspirillum seropedicae SmR1 HSERO_RS01980 ribonuclease II no data 24 26
  Dechlorosoma suillum PS Dsui_1943 ribosomal protein S1 no data 34 14
  Pseudomonas sp. SVBP6 COO64_RS00705 Tex family protein insig. 29 18
  Acinetobacter radioresistens SK82 MPMX26_02837 Protein YhgF cofit 28 17
  Azospirillum brasilense Sp245 AZOBR_RS14535 RNA-binding protein insig. 38 11
  Ralstonia solanacearum PSI07 RPSI07_RS19685 30S ribosomal protein S1 no data 33 14
  Pseudomonas fluorescens GW456-L13 PfGW456L13_428 Transcription accessory protein (S1 RNA-binding domain) insig. 30 13
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1771 Transcription accessory protein (S1 RNA-binding domain) sig. 30 13
  Acinetobacter baumannii LAC-4 RR41_RS01395 RNA-binding transcriptional accessory protein insig. 30 13
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3906 Transcription accessory protein (S1 RNA-binding domain) strong 32 14
  Pseudomonas fluorescens SBW25 PFLU_RS01275 RNA-binding transcriptional accessory protein cofit 31 15
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01275 RNA-binding transcriptional accessory protein insig. 31 15
  Pseudomonas stutzeri RCH2 Psest_3996 Transcriptional accessory protein strong 38 10
  Rhodospirillum rubrum S1H Rru_A3785 3' exoribonuclease (NCBI) no data 35 12
  Pseudomonas sp. S08-1 OH686_11100 Transcription accessory protein (S1 RNA-binding domain) cofit 34 12
  Ralstonia sp. UNC404CL21Col ABZR87_RS09475 30S ribosomal protein S1 no data 33 14
  Pseudomonas putida KT2440 PP_0245 putative transcriptional accessory protein insig. 33 13
  Pseudomonas aeruginosa MRSN321 PFGADD_05449 S1 motif domain-containing protein sig. 37 10
  Pseudomonas aeruginosa PA14 IKLFDK_27470 RNA-binding transcriptional accessory protein sig. 37 10
  Pseudomonas aeruginosa PUPa3 NPBIFN_05525 S1 motif domain-containing protein sig. 37 10
  Pseudomonas sp. BP01 JOY50_RS18355 Tex family protein insig. 33 13
  Pseudomonas fluorescens FW300-N2E3 AO353_11740 DNA damage response protein (yhgF like) (from data) sig. 32 12
  Castellaniella sp019104865 MT123 ABCV34_RS01870 Tex family protein sig. 37 13
  Pseudomonas simiae WCS417 PS417_01165 transcription accessory protein sig. 31 13
  Azospirillum sp. SherDot2 MPMX19_04277 Protein YhgF insig. 40 10
  Pseudomonas orientalis W4I3 QF045_RS04295 Tex family protein cofit 33 12
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00460 Protein YhgF cofit 31 13
  Lysobacter sp. OAE881 ABIE51_RS00300 Tex family protein insig. 30 16
  Kangiella aquimarina DSM 16071 B158DRAFT_0683 Transcriptional accessory protein strong 26 15
  Pseudomonas syringae pv. syringae B728a Psyr_0257 RNA binding S1 insig. 35 10
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0257 RNA binding S1 insig. 35 10
  Pseudomonas sp. RS175 PFR28_04867 Protein YhgF insig. 36 10
  Ralstonia solanacearum GMI1000 RS_RS04520 30S ribosomal protein S1 no data 33 14
  Acinetobacter baumannii LAC-4 RR41_RS12135 30S ribosomal protein S1 no data 29 14
  Pseudomonas fluorescens FW300-N2C3 AO356_10175 transcription accessory protein insig. 36 10
  Acidovorax sp. GW101-3H11 Ac3H11_2577 SSU ribosomal protein S1p no data 35 14
  Desulfovibrio vulgaris Hildenborough JW710 DVU3150 rpsA ribosomal protein S1 (TIGR) no data 34 10
  Cupriavidus basilensis FW507-4G11 RR42_RS04490 30S ribosomal protein S1 no data 33 14