Homologs of radA from Shewanella oneidensis MR-1

radA: DNA repair protein RadA (NCBI ptt file)
SEED: DNA repair protein RadA
KEGG: DNA repair protein RadA/Sms

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1226 radA DNA repair protein RadA (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_1049 DNA repair protein RadA (RefSeq) insig. 99 100
o Shewanella amazonensis SB2B Sama_0981 DNA repair protein RadA (RefSeq) strong 91 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1057 DNA repair protein RadA insig. 78 98
o Escherichia coli ECOR27 NOLOHH_03520 radA DNA repair protein RadA cofit 78 98
o Escherichia coli ECRC100 OKFHMN_11195 radA DNA repair protein RadA cofit 78 98
o Escherichia coli ECRC101 MCAODC_01710 radA DNA repair protein RadA cofit 78 98
o Escherichia coli ECRC102 NIAGMN_09045 radA DNA repair protein RadA insig. 78 98
o Escherichia coli ECRC62 BNILDI_08075 radA DNA repair protein RadA cofit 78 98
o Escherichia coli ECRC98 JDDGAC_14790 radA DNA repair protein RadA insig. 78 98
o Escherichia coli ECRC99 KEDOAH_16960 radA DNA repair protein RadA no data 78 98
o Escherichia coli BL21 ECD_04265 DNA repair protein strong 77 99
o Escherichia fergusonii Becca EFB2_04057 DNA repair protein RadA insig. 77 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03672 DNA repair protein RadA insig. 77 99
o Escherichia coli Nissle 1917 ECOLIN_RS25190 DNA repair protein RadA insig. 77 99
o Escherichia coli BW25113 b4389 radA predicted repair protein (NCBI) strong 77 99
o Escherichia coli ECOR38 HEPCGN_09195 radA DNA repair protein RadA insig. 77 98
o Enterobacter sp. TBS_079 MPMX20_00694 DNA repair protein RadA insig. 77 99
o Serratia liquefaciens MT49 IAI46_02945 DNA repair protein RadA insig. 76 100
o Klebsiella michiganensis M5al BWI76_RS04165 DNA repair protein RadA insig. 77 99
o Enterobacter asburiae PDN3 EX28DRAFT_3597 DNA repair protein RadA insig. 77 99
o Erwinia amylovora T8 OLJFJH_01590 DNA repair protein RadA insig. 77 98
o Rahnella sp. WP5 EX31_RS04030 DNA repair protein RadA insig. 76 99
o Erwinia tracheiphila SCR3 LU632_RS02550 radA DNA repair protein RadA insig. 75 100
o Pantoea sp. MT58 IAI47_16345 DNA repair protein RadA insig. 75 99
o Pectobacterium carotovorum WPP14 HER17_RS19085 DNA repair protein RadA cofit 76 99
o Alteromonas macleodii MIT1002 MIT1002_02706 Lon protease 2 insig. 72 100
o Dickeya dadantii 3937 DDA3937_RS02420 DNA repair protein RadA insig. 77 99
o Dickeya dianthicola ME23 DZA65_RS02485 DNA repair protein RadA insig. 76 99
o Dickeya dianthicola 67-19 HGI48_RS02380 DNA repair protein RadA insig. 76 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_11870 DNA repair protein RadA cofit 73 100
o Marinobacter adhaerens HP15 HP15_487 DNA repair protein RadA strong 71 100
o Pseudomonas fluorescens SBW25 PFLU_RS26230 DNA repair protein RadA insig. 62 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26230 DNA repair protein RadA insig. 62 100
o Pseudomonas sp. RS175 PFR28_03792 DNA repair protein RadA insig. 62 100
o Pseudomonas simiae WCS417 PS417_24305 DNA repair protein RadA strong 62 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15680 DNA repair protein RadA strong 62 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5076 DNA repair protein RadA strong 62 100
o Pseudomonas sp. DMC3 GFF3954 DNA repair protein RadA cofit 62 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1442 DNA repair protein RadA insig. 62 100
o Pseudomonas fluorescens FW300-N2E3 AO353_13980 DNA repair protein RadA strong 62 100
o Pseudomonas syringae pv. syringae B728a Psyr_4275 DNA replication and repair protein RadA insig. 62 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4275 DNA replication and repair protein RadA insig. 62 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2768 DNA repair protein RadA sig. 61 100
o Pseudomonas sp. S08-1 OH686_16185 DNA repair protein RadA insig. 61 100
o Pseudomonas sp. SVBP6 COO64_RS02920 radA DNA repair protein RadA insig. 61 100
o Pseudomonas stutzeri RCH2 Psest_3401 DNA repair protein RadA strong 61 100
o Pseudomonas aeruginosa PA14 IKLFDK_00465 DNA repair protein RadA insig. 61 100
o Pseudomonas putida KT2440 PP_4644 DNA repair enzyme insig. 60 100
o Pseudomonas sp. BP01 JOY50_RS15685 radA DNA repair protein RadA insig. 60 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0877 DNA replication and repair protein RadA strong 60 100
o Acinetobacter radioresistens SK82 MPMX26_02235 DNA repair protein RadA insig. 61 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3812.1 DNA repair protein RadA insig. 59 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07420 DNA repair protein RadA insig. 60 100
o Rhodanobacter sp. FW510-T8 OKGIIK_09580 radA DNA repair protein RadA insig. 60 100
o Rhodanobacter denitrificans MT42 LRK55_RS02280 DNA repair protein RadA cofit 60 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02525 DNA repair protein RadA insig. 60 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08845 DNA repair protein RadA strong 61 100
o Lysobacter sp. OAE881 ABIE51_RS07685 DNA repair protein RadA insig. 58 99
o Methylophilus sp. DMC18 GFF1046 DNA repair protein RadA insig. 55 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS06320 DNA repair protein RadA cofit 56 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS11670 DNA repair protein RadA insig. 55 100
o Paraburkholderia graminis OAS925 ABIE53_002526 DNA repair protein RadA/Sms sig. 56 100
o Burkholderia phytofirmans PsJN BPHYT_RS12235 DNA repair protein RadA strong 56 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00590 DNA replication and repair protein RadA insig. 56 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00210 DNA repair protein RadA insig. 56 100
o Ralstonia solanacearum UW163 UW163_RS13540 DNA repair protein RadA insig. 56 100
o Variovorax sp. OAS795 ABID97_RS03770 DNA repair protein RadA insig. 54 100
o Variovorax sp. SCN45 GFF5087 DNA repair protein RadA insig. 54 100
o Cupriavidus basilensis FW507-4G11 RR42_RS12030 DNA repair protein RadA no data 56 100
o Ralstonia solanacearum GMI1000 RS_RS06880 DNA repair protein RadA strong 56 100
o Dechlorosoma suillum PS Dsui_2413 DNA repair protein RadA cofit 56 100
o Ralstonia solanacearum PSI07 RPSI07_RS17270 DNA repair protein RadA strong 55 100
o Acidovorax sp. GW101-3H11 Ac3H11_3371 DNA repair protein RadA strong 55 100
o Herbaspirillum seropedicae SmR1 HSERO_RS10745 DNA repair protein RadA strong 54 100
o Castellaniella sp019104865 MT123 ABCV34_RS02345 DNA repair protein RadA insig. 53 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1833 DNA repair protein RadA insig. 53 100
o Azospirillum brasilense Sp245 AZOBR_RS08320 DNA repair protein RadA strong 49 99
o Azospirillum sp. SherDot2 MPMX19_00904 DNA repair protein RadA sig. 49 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1031 DNA repair protein RadA strong 46 100
o Synechocystis sp000284455 PCC 6803 SGL_RS11815 DNA repair protein RadA insig. 44 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14715 DNA repair protein RadA sig. 44 100
o Bacteroides stercoris CC31F HMPREF1181_RS00075 DNA repair protein RadA insig. 44 100
o Bacteroides thetaiotaomicron VPI-5482 BT2406 putative DNA repair protein (NCBI ptt file) strong 44 100
o Bacteroides ovatus ATCC 8483 BACOVA_03019 DNA repair protein RadA insig. 43 100
o Rhodopseudomonas palustris CGA009 TX73_015980 DNA repair protein RadA insig. 47 98
o Bosea sp. OAE506 ABIE41_RS17800 DNA repair protein RadA strong 49 94
o Phocaeicola dorei CL03T12C01 ABI39_RS10420 DNA repair protein RadA insig. 44 100
o Xanthobacter sp. DMC5 GFF1870 DNA repair protein RadA insig. 48 100
o Rhizobium sp. OAE497 ABIE40_RS06280 DNA repair protein RadA insig. 45 95
o Sinorhizobium meliloti 1021 SMc00556 DNA repair protein RadA strong 45 96
o Phaeobacter inhibens DSM 17395 PGA1_c10840 DNA repair protein RadA strong 49 93
o Magnetospirillum magneticum AMB-1 AMB_RS10555 DNA repair protein RadA insig. 48 94
o Caulobacter crescentus NA1000 CCNA_01732 DNA repair protein RadA strong 45 100
o Caulobacter crescentus NA1000 Δfur CCNA_01732 DNA repair protein RadA cofit 45 100
o Agrobacterium fabrum C58 Atu1077 DNA repair protein strong 45 95
o Synechococcus elongatus PCC 7942 Synpcc7942_1452 radA DNA repair protein RadA sig. 45 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22660 DNA repair protein RadA sig. 44 99
o Rhodospirillum rubrum S1H Rru_A0406 DNA repair protein RadA (NCBI) strong 47 94
o Dinoroseobacter shibae DFL-12 Dshi_2129 DNA repair protein RadA (RefSeq) strong 46 94