Homologs of rpe from Shewanella oneidensis MR-1

rpe: ribulose-phosphate 3-epimerase (NCBI ptt file)
SEED: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
KEGG: ribulose-phosphate 3-epimerase

156 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) no data 100 100
o Shewanella sp. ANA-3 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) no data 99 100
o Shewanella loihica PV-4 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) no data 95 100
o Shewanella amazonensis SB2B Sama_3362 ribulose-phosphate 3-epimerase (RefSeq) no data 94 99
o Enterobacter sp. TBS_079 MPMX20_04275 Ribulose-phosphate 3-epimerase strong 87 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) strong 87 99
o Escherichia coli BL21 ECD_03238 D-ribulose-5-phosphate 3-epimerase strong 87 99
o Escherichia fergusonii Becca EFB2_00442 Ribulose-phosphate 3-epimerase no data 87 99
o Escherichia coli ECOR27 NOLOHH_08920 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC100 OKFHMN_17130 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC101 MCAODC_07660 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC102 NIAGMN_14900 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC62 BNILDI_02600 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC98 JDDGAC_20760 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli ECRC99 KEDOAH_11010 dam adenine-specific DNA-methyltransferase no data 87 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00317 Ribulose-phosphate 3-epimerase no data 87 99
o Escherichia coli Nissle 1917 ECOLIN_RS19345 ribulose-phosphate 3-epimerase strong 87 99
o Escherichia coli BW25113 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) strong 87 99
o Klebsiella pneumoniae MKP103 KDGMDA_06895 ribulose-phosphate 3-epimerase no data 85 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS10245 rpe;go_function=D-ribulose-phosphate ribulose-phosphate 3-epimerase no data 85 99
o Escherichia coli ECOR38 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase insig. 87 99
o Enterobacter asburiae PDN3 EX28DRAFT_4156 ribulose-phosphate 3-epimerase insig. 87 99
o Serratia liquefaciens MT49 IAI46_23685 ribulose-phosphate 3-epimerase cofit 86 99
o Klebsiella michiganensis M5al BWI76_RS26070 ribulose-phosphate 3-epimerase no data 86 99
o Dickeya dianthicola ME23 DZA65_RS20745 ribulose-phosphate 3-epimerase no data 83 99
o Dickeya dianthicola 67-19 HGI48_RS19660 ribulose-phosphate 3-epimerase no data 83 99
o Dickeya dadantii 3937 DDA3937_RS19530 ribulose-phosphate 3-epimerase no data 83 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12050 rpe ribulose-phosphate 3-epimerase no data 84 98
o Erwinia tracheiphila SCR3 LU632_RS22850 rpe ribulose-phosphate 3-epimerase no data 84 98
o Pectobacterium carotovorum WPP14 HER17_RS01795 ribulose-phosphate 3-epimerase cofit 82 99
o Erwinia amylovora T8 OLJFJH_04075 ribulose-phosphate 3-epimerase no data 83 98
o Pantoea sp. MT58 IAI47_01910 ribulose-phosphate 3-epimerase no data 81 100
o Rahnella sp. WP5 EX31_RS04705 ribulose-phosphate 3-epimerase no data 81 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS01910 rpe ribulose-phosphate 3-epimerase no data 80 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_13285 ribulose-phosphate 3-epimerase strong 81 99
o Pseudomonas segetis P6 ACVTMO_RS04395 rpe ribulose-phosphate 3-epimerase no data 79 100
o Alteromonas macleodii MIT1002 MIT1002_00441 Ribulose-phosphate 3-epimerase no data 77 99
o Pseudomonas syringae pv. syringae B728a Psyr_4611 ribulose-5-phosphate 3-epimerase no data 75 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4611 ribulose-5-phosphate 3-epimerase no data 75 100
o Acinetobacter baumannii LAC-4 RR41_RS15745 ribulose-phosphate 3-epimerase no data 79 98
o Acinetobacter radioresistens SK82 MPMX26_02569 Ribulose-phosphate 3-epimerase no data 80 98
o Pseudomonas simiae WCS417 PS417_25735 ribulose-phosphate 3-epimerase no data 78 98
o Pseudomonas sp. RS175 PFR28_04049 Ribulose-phosphate 3-epimerase no data 78 98
o Pseudomonas fluorescens SBW25 PFLU_RS27390 ribulose-phosphate 3-epimerase no data 78 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27390 ribulose-phosphate 3-epimerase no data 78 98
o Pseudomonas stutzeri RCH2 Psest_3652 ribulose-phosphate 3-epimerase no data 77 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4820 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 77 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1215 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 76 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12200 ribulose-phosphate 3-epimerase strong 76 97
o Pseudomonas sp. SVBP6 COO64_RS22440 rpe ribulose-phosphate 3-epimerase cofit 78 98
o Marinobacter adhaerens HP15 HP15_3286 ribulose-phosphate 3-epimerase-like protein no data 75 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2543 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 76 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05267 Ribulose-phosphate 3-epimerase cofit 76 98
o Pseudomonas sp. S08-1 OH686_15115 ribulose-phosphate 3-epimerase no data 75 100
o Pseudomonas putida KT2440 PP_0415 ribulose-5-phosphate 3-epimerase no data 76 98
o Pseudomonas sp. BP01 JOY50_RS18210 rpe ribulose-phosphate 3-epimerase no data 76 98
o Pseudomonas fluorescens FW300-N2C3 AO356_14410 ribulose phosphate epimerase no data 77 98
o Pseudomonas fluorescens FW300-N2E3 AO353_07240 ribulose phosphate epimerase no data 76 98
o Pseudomonas aeruginosa MRSN321 DY961_RS23065 rpe;go_function=D-ribulose-phosphate ribulose-phosphate 3-epimerase no data 76 98
o Pseudomonas aeruginosa PA14 IKLFDK_22375 ribulose-phosphate 3-epimerase no data 76 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS36285 rpe;go_function=D-ribulose-phosphate ribulose-phosphate 3-epimerase no data 76 98
o Pseudomonas orientalis W4I3 QF045_RS00135 ribulose-phosphate 3-epimerase no data 76 98
o Pseudomonas protegens RBAN4 FABNJH_28355 rpe ribulose-phosphate 3-epimerase no data 75 98
o Pseudomonas sp. DMC3 GFF22 Ribulose-phosphate 3-epimerase no data 75 98
o Paraburkholderia graminis OAS925 ABIE53_003638 ribulose-phosphate 3-epimerase strong 74 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS27540 ribulose-phosphate 3-epimerase no data 73 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0267 ribulose-phosphate 3-epimerase no data 76 98
o Cupriavidus basilensis FW507-4G11 RR42_RS18285 ribulose-phosphate 3-epimerase no data 75 97
o Herbaspirillum seropedicae SmR1 HSERO_RS19425 ribulose-phosphate 3-epimerase no data 76 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase strong 73 99
o Dechlorosoma suillum PS Dsui_0221 ribulose-phosphate 3-epimerase no data 74 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS02130 ribulose-phosphate 3-epimerase no data 70 98
o Ralstonia solanacearum PSI07 RPSI07_RS10765 ribulose-phosphate 3-epimerase no data 70 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06475 ribulose-phosphate 3-epimerase no data 70 98
o Ralstonia solanacearum UW163 UW163_RS07150 ribulose-phosphate 3-epimerase no data 70 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS17105 ribulose-phosphate 3-epimerase strong 77 96
o Burkholderia phytofirmans PsJN BPHYT_RS17380 ribulose-phosphate 3-epimerase strong 70 99
o Lysobacter sp. OAE881 ABIE51_RS04135 ribulose-phosphate 3-epimerase no data 70 99
o Methylophilus sp. DMC18 GFF2051 Ribulose-phosphate 3-epimerase no data 70 98
o Ralstonia solanacearum GMI1000 RS_RS14420 ribulose-phosphate 3-epimerase no data 69 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11390 ribulose-phosphate 3-epimerase no data 78 96
o Rhodanobacter denitrificans MT42 LRK55_RS11120 ribulose-phosphate 3-epimerase no data 78 96
o Rhodanobacter sp. FW510-T8 OKGIIK_12435 rpe ribulose-phosphate 3-epimerase no data 79 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.605.1 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 72 96
  Pseudomonas sp. SVBP6 COO64_RS25425 rpe ribulose-phosphate 3-epimerase insig. 66 98
o Castellaniella sp019104865 MT123 ABCV34_RS10270 ribulose-phosphate 3-epimerase no data 71 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) insig. 68 94
o Variovorax sp. SCN45 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) strong 64 98
  Variovorax sp. OAS795 ABID97_RS12865 ribulose-phosphate 3-epimerase insig. 70 95
o Xanthobacter sp. DMC5 GFF2441 Ribulose-phosphate 3-epimerase no data 68 96
  Variovorax sp. OAS795 ABID97_RS04905 ribulose-phosphate 3-epimerase no data 64 98
  Paraburkholderia graminis OAS925 ABIE53_005503 ribulose-phosphate 3-epimerase insig. 63 99
o Acidovorax sp. GW101-3H11 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 67 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01310 ribulose-5-phosphate 3-epimerase (EC 5.1.3.1) insig. 62 99
o Azospirillum sp. SherDot2 MPMX19_02946 Ribulose-phosphate 3-epimerase insig. 64 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3096 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 65 96
o Rhodospirillum rubrum S1H Rru_A2402 Ribulose-phosphate 3-epimerase (NCBI) no data 58 96
  Azospirillum sp. SherDot2 MPMX19_01092 Ribulose-phosphate 3-epimerase no data 58 96
o Sphingobium sp. HT1-2 GFF3274 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) no data 56 96
o Magnetospirillum magneticum AMB-1 AMB_RS06980 ribulose-phosphate 3-epimerase no data 56 94
o Synechococcus elongatus PCC 7942 Synpcc7942_0604 rpe ribulose-phosphate 3-epimerase no data 53 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2240 ribulose-phosphate 3-epimerase no data 56 96
o Synechocystis sp000284455 PCC 6803 SGL_RS09950 ribulose-phosphate 3-epimerase no data 53 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13160 ribulose-phosphate 3-epimerase no data 53 94
o Azospirillum brasilense Sp245 AZOBR_RS06755 ribulose-phosphate 3-epimerase no data 56 96
o Caulobacter crescentus NA1000 CCNA_00100 Ribulose-5-phosphate 3-epimerase no data 50 94
o Caulobacter crescentus NA1000 Δfur CCNA_00100 Ribulose-5-phosphate 3-epimerase no data 50 94
o Sinorhizobium meliloti 1021 SMc00511 D-ribulose-5-phosphate 3-epimerase strong 48 97
o Agrobacterium fabrum C58 Atu1839 ribulose-phosphate 3-epimerase no data 52 96
  Sinorhizobium meliloti 1021 SM_b20195 pentose-5-phosphate-3-epimerase insig. 55 88
o Desulfovibrio vulgaris Hildenborough JW710 DVU2531 rpe ribulose-phosphate 3-epimerase (TIGR) no data 48 91
o Rhizobium sp. OAE497 ABIE40_RS10105 ribulose-phosphate 3-epimerase no data 48 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08990 ribulose-phosphate 3-epimerase no data 46 95
o Fusobacterium nucleatum SB010 HUW76_06410 ribulose-phosphate 3-epimerase no data 47 98
o Phaeobacter inhibens DSM 17395 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe no data 51 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21180 ribulose-phosphate 3-epimerase insig. 43 96
o Rhodopseudomonas palustris CGA009 TX73_019755 ribulose-phosphate 3-epimerase no data 51 90
o Dinoroseobacter shibae DFL-12 Dshi_3006 Ribulose-phosphate 3-epimerase (RefSeq) no data 51 90
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3575 ribulose-phosphate 3-epimerase strong 43 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06500 ribulose-phosphate 3-epimerase no data 43 94
o Mycobacterium tuberculosis H37Rv Rv1408 Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase) no data 51 89
o Cellulophaga baltica 18 M666_RS08505 ribulose-phosphate 3-epimerase no data 44 96
o Desulfovibrio vulgaris Miyazaki F DvMF_0977 Ribulose-phosphate 3-epimerase (RefSeq) no data 45 91
o Bifidobacterium breve UCC2003 BBR_RS15800 ribulose-phosphate 3-epimerase no data 42 100
o Bacteroides stercoris CC31F HMPREF1181_RS06505 ribulose-phosphate 3-epimerase sig. 43 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase no data 41 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07710 ribulose-phosphate 3-epimerase no data 41 96
o Bacteroides ovatus ATCC 8483 BACOVA_01203 ribulose-phosphate 3-epimerase no data 40 96
o Bacteroides thetaiotaomicron VPI-5482 BT3946 ribulose-phosphate 3-epimerase (NCBI ptt file) no data 40 96
o Phocaeicola dorei CL03T12C01 ABI39_RS00225 ribulose-phosphate 3-epimerase no data 40 96
o Methanococcus maripaludis JJ MMJJ_RS08595 ribulose-phosphate 3-epimerase no data 40 94
o Methanococcus maripaludis S2 MMP_RS05755 ribulose-phosphate 3-epimerase no data 40 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05000 ribulose-phosphate 3-epimerase no data 41 92
  Klebsiella pneumoniae MKP103 KDGMDA_22170 D-allulose 6-phosphate 3-epimerase insig. 38 87
  Klebsiella pneumoniae MRSN742743 KFA93_RS17175 alsE;inference=COORDINATES D-allulose 6-phosphate 3-epimerase no data 38 87
  Pantoea sp. MT58 IAI47_19235 ribulose-phosphate 3-epimerase insig. 36 89
  Escherichia fergusonii Becca EFB2_04497 D-allulose-6-phosphate 3-epimerase insig. 34 97
  Escherichia coli Nissle 1917 ECOLIN_RS23665 D-allulose-6-phosphate 3-epimerase insig. 34 97
  Escherichia coli BL21 ECD_03957 allulose-6-phosphate 3-epimerase insig. 35 97
  Escherichia coli ECOR27 NOLOHH_04990 alsE D-allulose-6-phosphate 3-epimerase insig. 35 97
  Escherichia coli ECOR38 HEPCGN_11360 alsE D-allulose-6-phosphate 3-epimerase insig. 35 97
  Escherichia coli BW25113 b4085 alsE allulose-6-phosphate 3-epimerase (NCBI) insig. 35 97
  Klebsiella michiganensis M5al BWI76_RS02150 allulose-6-phosphate 3-epimerase sig. 35 87
  Pantoea sp. MT58 IAI47_04635 ribulose-phosphate 3-epimerase insig. 36 87
  Enterobacter sp. TBS_079 MPMX20_00305 D-allulose-6-phosphate 3-epimerase insig. 35 87
  Klebsiella michiganensis M5al BWI76_RS23675 allulose-6-phosphate 3-epimerase sig. 34 91
  Klebsiella pneumoniae MKP103 KDGMDA_21940 D-allulose 6-phosphate 3-epimerase insig. 33 91
  Klebsiella pneumoniae MRSN742743 KFA93_RS17075 alsE;inference=COORDINATES D-allulose 6-phosphate 3-epimerase insig. 33 91
  Rahnella sp. WP5 EX31_RS21555 ribulose-phosphate 3-epimerase insig. 34 95
  Bifidobacterium breve UCC2003 BBR_RS17570 ribulose-phosphate 3-epimerase insig. 30 92
  Escherichia fergusonii Becca EFB2_04149 Ribulose-phosphate 3-epimerase insig. 31 94
  Escherichia coli Nissle 1917 ECOLIN_RS26950 ribulose-phosphate 3 epimerase family protein insig. 31 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2607 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) insig. 31 93
  Escherichia coli BL21 ECD_04166 putative epimerase insig. 31 94
  Escherichia coli BW25113 b4301 sgcE ribulose-phosphate 3-epimerase (NCBI) sig. 31 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2301 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) insig. 27 86