Homologs of SO0037 from Shewanella oneidensis MR-1

Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file)
SEED: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
KEGG: putative translation factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) no data 100 100
o Shewanella sp. ANA-3 Shewana3_0040 translation factor SUA5 (RefSeq) no data 95 100
o Shewanella loihica PV-4 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) no data 69 98
o Shewanella amazonensis SB2B Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) insig. 67 99
o Pectobacterium carotovorum WPP14 HER17_RS02245 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 92
o Enterobacter sp. TBS_079 MPMX20_04190 Threonylcarbamoyl-AMP synthase no data 54 94
o Enterobacter asburiae PDN3 EX28DRAFT_0045 Putative translation factor (SUA5) no data 54 94
o Serratia liquefaciens MT49 IAI46_23245 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 90
o Escherichia coli ECRC62 BNILDI_02170 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECOR27 NOLOHH_09350 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECOR38 HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli BL21 ECD_03133 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase no data 54 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00421 Threonylcarbamoyl-AMP synthase no data 54 94
o Escherichia coli BW25113 b3282 yrdC predicted ribosome maturation factor (NCBI) no data 54 94
o Escherichia coli ECRC101 OKFHMN_17560 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECRC101 MCAODC_08080 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECRC102 NIAGMN_15320 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECRC98 JDDGAC_21180 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia coli ECRC99 KEDOAH_10590 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 54 94
o Escherichia fergusonii Becca EFB2_00541 Threonylcarbamoyl-AMP synthase no data 53 94
o Escherichia coli Nissle 1917 ECOLIN_RS18845 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_00270 threonylcarbamoyl-AMP synthase insig. 50 94
o Dickeya dianthicola 67-19 HGI48_RS19195 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 91
o Dickeya dianthicola ME23 DZA65_RS20320 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 91
o Klebsiella michiganensis M5al BWI76_RS25650 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 92
o Dickeya dadantii 3937 DDA3937_RS19105 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 90
o Rahnella sp. WP5 EX31_RS15955 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 53 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 52 94
o Erwinia tracheiphila SCR3 LU632_RS22450 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 49 93
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4753.1 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 49 91
o Lysobacter sp. OAE881 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein no data 50 91
o Alteromonas macleodii MIT1002 MIT1002_00025 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN no data 46 90
o Pantoea sp. MT58 IAI47_02310 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein no data 41 97
o Rhodanobacter denitrificans MT42 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein no data 44 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein no data 44 91
o Pseudomonas sp. S08-1 OH686_12500 Threonylcarbamoyl-AMP synthase no data 46 94
o Rhodanobacter sp. FW510-T8 OKGIIK_13760 Threonylcarbamoyl-AMP synthase no data 43 91
o Marinobacter adhaerens HP15 HP15_3747 Sua5/YciO/YrdC/YwlC family protein sig. 48 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0403 Putative translation factor (SUA5) cofit 43 93
o Pseudomonas stutzeri RCH2 Psest_0026 Putative translation factor (SUA5) no data 44 94
o Pseudomonas syringae pv. syringae B728a Psyr_0022 translation factor SUA5 no data 44 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0022 translation factor SUA5 no data 44 91
o Pseudomonas sp. RS175 PFR28_04658 Threonylcarbamoyl-AMP synthase no data 44 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 44 90
o Pseudomonas fluorescens FW300-N2C3 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 44 90
o Pseudomonas putida KT2440 PP_0070 Threonylcarbamoyl-AMP synthase no data 41 91
o Pseudomonas fluorescens FW300-N2E3 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 43 90
o Pseudomonas fluorescens SBW25 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 43 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 43 90
o Pseudomonas simiae WCS417 PS417_00110 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 43 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_647 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 42 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 41 92
o Acinetobacter radioresistens SK82 MPMX26_00113 Threonylcarbamoyl-AMP synthase no data 39 98
  Marinobacter adhaerens HP15 HP15_4108 translation factor, SUA5 type insig. 36 93
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS07710 L-threonylcarbamoyladenylate synthase no data 30 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17455 L-threonylcarbamoyladenylate synthase no data 36 88
  Bosea sp. OAE506 ABIE41_RS22310 L-threonylcarbamoyladenylate synthase no data 34 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02115 threonylcarbamoyl-AMP synthase sig. 31 99
  Azospirillum sp. SherDot2 MPMX19_01996 Threonylcarbamoyl-AMP synthase no data 34 89
  Rhodopseudomonas palustris CGA009 TX73_005535 L-threonylcarbamoyladenylate synthase no data 35 79
  Azospirillum brasilense Sp245 AZOBR_RS05775 translation factor Sua5 no data 31 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02975 threonylcarbamoyl-AMP synthase no data 33 91
  Erwinia tracheiphila SCR3 LU632_RS12745 threonylcarbamoyl-AMP synthase insig. 31 94
  Kangiella aquimarina DSM 16071 B158DRAFT_2305 translation factor SUA5 insig. 28 99
  Shewanella amazonensis SB2B Sama_2993 SUA5/YciO/YrdC family translation initiation protein (RefSeq) sig. 35 91
  Serratia liquefaciens MT49 IAI46_14010 threonylcarbamoyl-AMP synthase insig. 34 89
  Magnetospirillum magneticum AMB-1 AMB_RS18790 threonylcarbamoyl-AMP synthase no data 35 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_05965 threonylcarbamoyl-AMP synthase insig. 31 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0338 Sua5/YciO/YrdC/YwlC family protein no data 33 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog insig. 32 94
  Escherichia coli BL21 ECD_01241 putative RNA binding protein insig. 32 89
  Escherichia fergusonii Becca EFB2_02660 putative protein YciO insig. 32 89
  Escherichia coli ECOR27 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli ECOR38 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase cofit 32 89
  Escherichia coli ECRC101 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli ECRC101 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase insig. 32 89
  Escherichia coli ECRC102 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli ECRC62 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase insig. 32 89
  Escherichia coli ECRC98 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli ECRC99 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02417 putative protein YciO insig. 32 89
  Escherichia coli Nissle 1917 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase no data 32 89
  Escherichia coli BW25113 b1267 yciO orf, hypothetical protein (VIMSS) no data 32 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11045 threonylcarbamoyl-AMP synthase no data 28 93
  Klebsiella michiganensis M5al BWI76_RS11870 hypothetical protein sig. 32 89
  Rahnella sp. WP5 EX31_RS09945 threonylcarbamoyl-AMP synthase insig. 32 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1308 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family no data 31 80
  Phaeobacter inhibens DSM 17395 PGA1_c03140 putative tRNA threonylcarbamoyladenosine biosynthesis protein no data 31 86
o Bacteroides ovatus ATCC 8483 BACOVA_01200 Sua5/YciO/YrdC/YwlC family protein no data 31 93
  Pantoea sp. MT58 IAI47_09200 threonylcarbamoyl-AMP synthase insig. 30 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05100 threonylcarbamoyl-AMP synthase insig. 27 95
  Shewanella amazonensis SB2B Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) strong 30 94
o Bacteroides thetaiotaomicron VPI-5482 BT3943 conserved hypothetical protein, putative translation factor (NCBI ptt file) no data 30 93
o Desulfovibrio vulgaris Hildenborough JW710 DVU1255 Sua5/YciO/YrdC/YwlC family protein (TIGR) cofit 31 96
  Pseudomonas sp. RS175 PFR28_03318 putative protein YciO insig. 29 97
o Fusobacterium nucleatum SB010 HUW76_09910 threonylcarbamoyl-AMP synthase no data 33 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0371 Sua5/YciO/YrdC/YwlC family protein insig. 29 95
o Bacteroides stercoris CC31F HMPREF1181_RS06520 threonylcarbamoyl-AMP synthase no data 29 93
  Pseudomonas fluorescens FW300-N2E3 AO353_18525 hypothetical protein insig. 28 99