Conservation of cofitness between CSW01_00140 and CSW01_00145 in Vibrio cholerae E7946 ATCC 55056

118 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00140 dihydroxy-acid dehydratase 1.0 CSW01_00145 branched-chain-amino-acid transaminase 0.52 3
Pectobacterium carotovorum WPP14 0.85 HER17_RS01075 dihydroxy-acid dehydratase 0.75 HER17_RS01070 branched-chain amino acid transaminase low > 75
Escherichia coli BW25113 0.85 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.73 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.99 2
Klebsiella michiganensis M5al 0.85 BWI76_RS00975 dihydroxy-acid dehydratase 0.74 BWI76_RS00970 branched chain amino acid aminotransferase 0.60 81
Klebsiella pneumoniae MKP103 0.85 KDGMDA_09490 dihydroxy-acid dehydratase 0.75 KDGMDA_09485 branched-chain amino acid transaminase low > 95
Escherichia coli ECOR27 0.85 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.73 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.99 1
Escherichia coli Nissle 1917 0.85 ECOLIN_RS21665 dihydroxy-acid dehydratase 0.73 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 55
Escherichia fergusonii Becca 0.85 EFB2_04865 Dihydroxy-acid dehydratase 0.73 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC62 0.85 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.73 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.95 10
Escherichia coli ECRC99 0.85 KEDOAH_13510 ilvD dihydroxy-acid dehydratase 0.73 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC100 0.85 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.73 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.98 20
Escherichia coli ECRC101 0.85 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.73 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.98 1
Escherichia coli ECRC102 0.85 NIAGMN_12395 ilvD dihydroxy-acid dehydratase 0.73 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.97 24
Escherichia coli ECRC98 0.85 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.73 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.99 1
Escherichia coli BL21 0.84 ECD_03649 dihydroxyacid dehydratase 0.73 ECD_03648 branched-chain amino acid aminotransferase 0.96 8
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_04282 Dihydroxy-acid dehydratase 0.73 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 74
Escherichia coli ECOR38 0.84 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.73 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.96 19
Enterobacter asburiae PDN3 0.84 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.72 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.96 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.73 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.47 9
Dickeya dadantii 3937 0.84 DDA3937_RS20155 dihydroxy-acid dehydratase 0.75 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.82 43
Erwinia amylovora T8 0.84 OLJFJH_06230 dihydroxy-acid dehydratase 0.73 OLJFJH_06225 branched-chain-amino-acid transaminase 0.94 7
Enterobacter sp. TBS_079 0.84 MPMX20_04499 Dihydroxy-acid dehydratase 0.73 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Pantoea agglomerans CFBP13505 P0401 0.84 PagCFBP13505_RS20930 dihydroxy-acid dehydratase 0.75 PagCFBP13505_RS20935 branched-chain amino acid transaminase 0.60 37
Dickeya dianthicola 67-19 0.83 HGI48_RS20295 dihydroxy-acid dehydratase 0.74 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Pantoea sp. MT58 0.83 IAI47_01035 dihydroxy-acid dehydratase 0.75 IAI47_01030 branched-chain amino acid transaminase 0.99 2
Dickeya dianthicola ME23 0.83 DZA65_RS21335 dihydroxy-acid dehydratase 0.74 DZA65_RS21340 branched-chain amino acid transaminase 0.86 15
Serratia liquefaciens MT49 0.82 IAI46_24345 dihydroxy-acid dehydratase 0.75 IAI46_24350 branched-chain-amino-acid transaminase low > 87
Erwinia tracheiphila HP pepo 2.2 0.82 IJEDHG_09115 ilvD dihydroxy-acid dehydratase 0.73 IJEDHG_09120 ilvE branched-chain amino acid transaminase 0.88 7
Erwinia tracheiphila SCR3 0.82 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.73 LU632_RS24405 branched-chain amino acid transaminase 0.92 3
Rahnella sp. WP5 0.80 EX31_RS15005 dihydroxy-acid dehydratase 0.75 EX31_RS15000 branched-chain amino acid transaminase 0.89 66
Shewanella sp. ANA-3 0.79 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.15 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.18 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.78 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.15 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.88 60
Alteromonas macleodii MIT1002 0.78 MIT1002_04041 Dihydroxy-acid dehydratase 0.15 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.98 11
Shewanella loihica PV-4 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.67 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.93 39
Pseudomonas sp. BP01 0.77 JOY50_RS20745 ilvD dihydroxy-acid dehydratase 0.16 JOY50_RS06005 branched-chain amino acid aminotransferase 0.87 80
Pseudomonas aeruginosa PUPa3 0.77 DQ20_RS37560 ilvD;go_function=dihydroxy-acid dihydroxy-acid dehydratase 0.45 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase low > 101
Pseudomonas aeruginosa PA14 0.77 IKLFDK_23670 dihydroxy-acid dehydratase 0.45 IKLFDK_28470 branched-chain-amino-acid transaminase low > 98
Pseudomonas putida KT2440 0.77 PP_5128 Dihydroxy-acid dehydratase 0.16 PP_3511 Branched-chain-amino-acid aminotransferase 0.93 3
Pseudomonas simiae WCS417 0.77 PS417_26890 dihydroxy-acid dehydratase 0.17 PS417_17565 branched-chain amino acid aminotransferase 0.43 79
Pseudomonas aeruginosa MRSN321 0.77 DY961_RS21735 ilvD;go_function=dihydroxy-acid dihydroxy-acid dehydratase 0.45 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase low > 100
Pseudomonas sp. RS175 0.76 PFR28_04278 Dihydroxy-acid dehydratase 0.17 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Pseudomonas fluorescens SBW25 0.76 PFLU_RS28535 dihydroxy-acid dehydratase 0.17 PFLU_RS19375 branched-chain amino acid aminotransferase 0.48 61
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS28535 dihydroxy-acid dehydratase 0.17 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas sp. SVBP6 0.76 COO64_RS12815 ilvD dihydroxy-acid dehydratase 0.16 COO64_RS09990 branched-chain amino acid aminotransferase 0.98 21
Pseudomonas orientalis W4I3 0.76 QF045_RS01290 dihydroxy-acid dehydratase 0.16 QF045_RS19115 branched-chain amino acid aminotransferase 0.98 17
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_08345 dihydroxy-acid dehydratase 0.16 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.28 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_13250 dihydroxy-acid dehydratase 0.17 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas sp. DMC3 0.76 GFF246 Dihydroxy-acid dehydratase 0.16 GFF1604 putative branched-chain-amino-acid aminotransferase 0.99 1
Pseudomonas lactucae CFBP13502 0.76 GEMAOFIL_05518 Dihydroxy-acid dehydratase 0.16 GEMAOFIL_03807 Branched-chain-amino-acid aminotransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.17 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas stutzeri RCH2 0.76 Psest_0234 dihydroxy-acid dehydratase 0.45 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Pseudomonas sp. S08-1 0.76 OH686_14100 dihydroxy-acid dehydratase 0.45 OH686_09695 branched-chain amino acid aminotransferase low > 80
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.18 ABIE40_RS11350 branched-chain amino acid aminotransferase low > 107
Pseudomonas segetis P6 0.76 ACVTMO_RS22070 ilvD dihydroxy-acid dehydratase 0.46 ACVTMO_RS20880 branched-chain amino acid transaminase low > 75
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.17 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_0469 dihydroxyacid dehydratase 0.18 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_0469 dihydroxyacid dehydratase 0.18 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.66 52
Sinorhizobium meliloti 1021 0.75 SMc04045 dihydroxy-acid dehydratase 0.19 SMc02896 branched-chain amino acid aminotransferase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.75 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.17 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.67 72
Agrobacterium fabrum C58 0.75 Atu1918 dihydroxy-acid dehydratase 0.17 Atu0871 branched-chain-amino-acid aminotransferase — —
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS00240 dihydroxy-acid dehydratase 0.22 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Dechlorosoma suillum PS 0.74 Dsui_1122 dihydroxy-acid dehydratase 0.47 Dsui_3339 branched-chain amino acid aminotransferase, group I — —
Rhodopseudomonas palustris CGA009 0.74 TX73_007515 dihydroxy-acid dehydratase 0.16 TX73_022650 branched-chain amino acid aminotransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_05312 dihydroxyacid dehydratase 0.45 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_006513 dihydroxy-acid dehydratase 0.45 ABIE53_003432 branched-chain amino acid aminotransferase low > 113
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS21095 dihydroxy-acid dehydratase 0.45 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Acidovorax sp. GW101-3H11 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.47 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Methylophilus sp. DMC18 0.73 GFF1637 Dihydroxy-acid dehydratase 0.44 GFF2600 Branched-chain-amino-acid aminotransferase — —
Azospirillum sp. SherDot2 0.73 MPMX19_05356 Dihydroxy-acid dehydratase 0.17 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Synechococcus elongatus PCC 7942 0.73 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase 0.29 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase — —
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS02650 dihydroxy-acid dehydratase 0.45 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Azospirillum brasilense Sp245 0.72 AZOBR_RS15015 dihydroxy-acid dehydratase 0.30 AZOBR_RS16425 branched-chain amino acid aminotransferase low > 97
Caulobacter crescentus NA1000 Δfur 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.30 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Caulobacter crescentus NA1000 0.72 CCNA_03139 dihydroxy-acid dehydratase 0.30 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Magnetospirillum magneticum AMB-1 0.72 AMB_RS12770 dihydroxy-acid dehydratase 0.32 AMB_RS02850 branched-chain amino acid aminotransferase — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS14810 dihydroxy-acid dehydratase 0.43 ABCV34_RS07930 branched-chain amino acid transaminase 0.55 38
Phaeobacter inhibens DSM 17395 0.72 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE 0.79 32
Acinetobacter baumannii LAC-4 0.71 RR41_RS00130 dihydroxy-acid dehydratase 0.42 RR41_RS02965 branched-chain amino acid transaminase low > 55
Marinobacter adhaerens HP15 0.71 HP15_595 dihydroxy-acid dehydratase 0.44 HP15_436 branched-chain-amino-acid aminotransferase — —
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase 0.44 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Rhodospirillum rubrum S1H 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) 0.33 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) low > 58
Xanthobacter sp. DMC5 0.70 GFF4574 Dihydroxy-acid dehydratase 0.31 GFF1936 Branched-chain-amino-acid aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.45 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Phocaeicola dorei CL03T12C01 0.63 ABI39_RS12715 dihydroxy-acid dehydratase 0.15 ABI39_RS01415 branched-chain amino acid aminotransferase 0.68 67
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.17 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.18 HMPREF1078_RS07855 branched-chain amino acid aminotransferase low > 61
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.15 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.86 20
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.16 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.61 BACOVA_03302 dihydroxy-acid dehydratase 0.28 BACOVA_03679 branched-chain-amino-acid transaminase low > 96
Bifidobacterium breve UCC2003 0.56 BBR_RS17635 dihydroxy-acid dehydratase 0.16 BBR_RS15210 branched-chain amino acid aminotransferase 0.78 5
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.47 DVU3197 ilvE branched-chain amino acid aminotransferase (TIGR) 0.95 4
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.46 DvMF_2268 branched-chain amino acid aminotransferase (RefSeq) low > 51
Methanococcus maripaludis JJ 0.34 MMJJ_RS03675 dihydroxy-acid dehydratase 0.29 MMJJ_RS04725 branched-chain-amino-acid transaminase — —
Methanococcus maripaludis S2 0.34 MMP_RS01700 dihydroxy-acid dehydratase 0.29 MMP_RS00760 branched-chain-amino-acid transaminase low > 25
Synechocystis sp000284455 PCC 6803 0.32 SGL_RS18015 dihydroxy-acid dehydratase 0.28 SGL_RS16510 branched-chain amino acid transaminase — —
Mycobacterium tuberculosis H37Rv 0.31 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) 0.20 Rv2210c Branched-chain amino acid transaminase IlvE — —
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.43 ABID97_RS03790 branched-chain amino acid transaminase — —
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.43 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Cellulophaga baltica 18 0.30 M666_RS14910 dihydroxy-acid dehydratase 0.16 M666_RS19255 branched-chain amino acid aminotransferase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.27 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Acinetobacter radioresistens SK82 0.30 MPMX26_03019 Dihydroxy-acid dehydratase 0.41 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.92 7
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS16210 dihydroxy-acid dehydratase 0.19 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Ralstonia solanacearum GMI1000 0.29 RS_RS12105 dihydroxy-acid dehydratase 0.46 RS_RS02840 branched-chain amino acid transaminase — —
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.21 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.99 13
Bosea sp. OAE506 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase 0.47 RPSI07_RS21175 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase — —
Ralstonia solanacearum UW163 0.29 UW163_RS09135 dihydroxy-acid dehydratase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_06935 dihydroxy-acid dehydratase 0.31 CA264_06940 branched-chain amino acid aminotransferase low > 74
Lysobacter sp. OAE881 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.53 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase 0.57 ABZR86_RS15965 branched-chain amino acid transaminase 0.95 4
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.54 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 53
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS15795 dihydroxy-acid dehydratase 0.27 CA265_RS15785 branched-chain-amino-acid transaminase low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.28 A4249_RS09820 branched-chain amino acid aminotransferase — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS10320 dihydroxy-acid dehydratase 0.54 LRK54_RS10340 branched-chain amino acid transaminase 0.90 5
Rhodanobacter denitrificans MT42 0.25 LRK55_RS09960 dihydroxy-acid dehydratase 0.54 LRK55_RS09980 branched-chain amino acid transaminase 0.83 1
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS03095 dihydroxy-acid dehydratase 0.54 LRK53_RS03115 branched-chain amino acid transaminase 0.71 5

Not shown: 3 genomes with orthologs for CSW01_00140 only; 1 genomes with orthologs for CSW01_00145 only