Homologs of SMc04090 from Sinorhizobium meliloti 1021

sun protein
SEED: 16S rRNA m(5)C 967 methyltransferase (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc04090 sun protein insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 70 99
o Agrobacterium fabrum C58 Atu2825 Sun protein sig. 65 98
o Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 49 93
o Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 49 93
o Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 46 92
o Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 45 90
o Magnetospirillum magneticum AMB-1 AMB_RS00745 MFS transporter insig. 45 91
o Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 41 92
o Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 41 92
o Rhodospirillum rubrum S1H Rru_A3660 tRNA and rRNA cytosine-C5-methylase (NCBI) insig. 42 90
o Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 41 85
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 39 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases insig. 39 92
o Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 38 85
o Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 91
o Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 80
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 34 79
o Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 91
o Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 92
o Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 91
  Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 33 78
  Escherichia coli BL21 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent cofit 34 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B strong 34 78
  Escherichia coli BW25113 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) strong 34 78
  Escherichia coli ECOR27 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 78
  Escherichia coli ECRC62 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 34 78
  Serratia liquefaciens MT49 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 80
o Pectobacterium carotovorum WPP14 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 31 92
o Erwinia tracheiphila SCR3 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 91
  Escherichia coli ECOR38 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 78
  Escherichia fergusonii Becca EFB2_00535 Ribosomal RNA small subunit methyltransferase B insig. 34 78
  Escherichia coli Nissle 1917 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 34 78
  Escherichia coli ECRC101 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 78
  Escherichia coli ECRC101 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 78
  Escherichia coli ECRC102 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 78
  Escherichia coli ECRC98 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no data 33 78
  Escherichia coli ECRC99 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no data 33 78
  Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 33 80
  Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 33 78
o Shewanella loihica PV-4 Shew_3738 sun protein (RefSeq) strong 29 91
o Acinetobacter radioresistens SK82 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B insig. 30 86
o Rahnella sp. WP5 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 80
o Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 33 83
o Alteromonas macleodii MIT1002 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B cofit 31 85
o Shewanella sp. ANA-3 Shewana3_0033 sun protein (RefSeq) strong 30 91
o Kangiella aquimarina DSM 16071 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB insig. 31 84
o Shewanella oneidensis MR-1 SO0030 sun sun protein (NCBI ptt file) sig. 29 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 35 85
o Pseudomonas stutzeri RCH2 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB sig. 33 92
o Pseudomonas fluorescens FW300-N2C3 AO356_11275 16S rRNA methyltransferase strong 34 85
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 35 83
o Pseudomonas sp. RS175 PFR28_04663 Ribosomal RNA small subunit methyltransferase B sig. 35 85
o Pseudomonas fluorescens SBW25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 85
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 34 85
o Ralstonia solanacearum PSI07 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 87
o Pseudomonas fluorescens FW300-N2E3 AO353_10630 16S rRNA methyltransferase sig. 34 85
o Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 32 85
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 33 85
o Pseudomonas simiae WCS417 PS417_00085 16S rRNA methyltransferase insig. 34 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 34 70
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) insig. 33 84
  Cupriavidus basilensis FW507-4G11 RR42_RS20450 16S rRNA methyltransferase strong 37 59
o Lysobacter sp. OAE881 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 93
o Pseudomonas putida KT2440 PP_0066 Ribosomal RNA small subunit methyltransferase B strong 32 85
o Pseudomonas sp. S08-1 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 33 84
  Marinobacter adhaerens HP15 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase strong 30 73
o Pseudomonas fluorescens GW456-L13 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 33 85
o Pseudomonas syringae pv. syringae B728a Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 33 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 33 83
  Castellaniella sp019104865 MT123 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 72
o Rhodanobacter sp. FW510-T8 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 71
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4741.1 hypothetical protein insig. 34 71
  Dechlorosoma suillum PS Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB strong 33 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase insig. 35 58
o Variovorax sp. SCN45 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) insig. 33 86
  Herbaspirillum seropedicae SmR1 HSERO_RS00355 methyltransferase insig. 34 61
o Ralstonia solanacearum GMI1000 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 83
  Acidovorax sp. GW101-3H11 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 35 60
  Burkholderia phytofirmans PsJN BPHYT_RS01475 16S rRNA methyltransferase insig. 35 57
  Paraburkholderia graminis OAS925 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase insig. 35 58
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 78
  Ralstonia solanacearum UW163 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 78
  Fusobacterium nucleatum SB010 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 24 73
o Rhodanobacter denitrificans MT42 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 91
o Variovorax sp. OAS795 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 32 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 33 61
  Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 33 61
  Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 32 61
  Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 33 61
  Ralstonia sp. UNC404CL21Col ABZR87_RS00375 RsmB/NOP family class I SAM-dependent RNA methyltransferase sig. 32 61
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03035 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 35 62
  Rhodospirillum rubrum S1H Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) cofit 31 85
  Cupriavidus basilensis FW507-4G11 RR42_RS17045 SAM-dependent methyltransferase sig. 33 61
  Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 32 62
  Caulobacter crescentus NA1000 CCNA_01691 tRNA/rRNA methyltransferase strong 32 61
  Caulobacter crescentus NA1000 Δfur CCNA_01691 tRNA/rRNA methyltransferase cofit 32 61
  Castellaniella sp019104865 MT123 ABCV34_RS05220 RsmB/NOP family class I SAM-dependent RNA methyltransferase cofit 33 61