Homologs of MMP_RS06965 from Methanococcus maripaludis S2

TIGR04014 family B12-binding domain/radical SAM domain-containing protein
SEED: UPF0004 protein MJ0865

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS06965 TIGR04014 family B12-binding domain/radical SAM domain-containing protein strong 100 100
o Methanococcus maripaludis JJ MMJJ_RS07390 TIGR04014 family B12-binding domain/radical SAM domain-containing protein sig. 95 100
  Methanococcus maripaludis S2 MMP_RS00285 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 29 63
  Magnetospirillum magneticum AMB-1 AMB_RS00595 B12-binding domain-containing radical SAM protein cofit 26 61
  Methanococcus maripaludis JJ MMJJ_RS05200 TIGR04013 family B12-binding domain/radical SAM domain-containing protein insig. 27 63
  Alteromonas macleodii MIT1002 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB insig. 27 54
  Acidovorax sp. GW101-3H11 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase insig. 26 65
  Variovorax sp. OAS795 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 65
  Variovorax sp. SCN45 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) insig. 26 65
  Phaeobacter inhibens DSM 17395 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB sig. 24 59
  Ralstonia sp. UNC404CL21Col ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 50
  Pseudomonas simiae WCS417 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 26 65
  Pseudomonas fluorescens SBW25 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 26 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 26 65
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 25 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF613 tRNA-i(6)A37 methylthiotransferase cofit 25 65
  Pseudomonas syringae pv. syringae B728a Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB sig. 25 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 25 65
  Acinetobacter baumannii LAC-4 RR41_RS08040 30S ribosomal protein S12 methylthiotransferase RimO no data 26 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase sig. 24 65
  Pseudomonas orientalis W4I3 QF045_RS26910 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 65
  Pseudomonas fluorescens FW300-N2E3 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 24 65
  Sinorhizobium meliloti 1021 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 25 58
  Marinobacter adhaerens HP15 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 26 62
  Ralstonia solanacearum PSI07 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 50
  Agrobacterium fabrum C58 Atu0356 miaB protein sig. 25 58
  Ralstonia solanacearum GMI1000 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 50
  Dechlorosoma suillum PS Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB cofit 26 50
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 26 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase insig. 23 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS35045 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 26 62
  Pseudomonas fluorescens FW300-N2C3 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 25 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase sig. 25 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS21480 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 27 47
  Phocaeicola dorei CL03T12C01 ABI39_RS17125 30S ribosomal protein S12 methylthiotransferase RimO cofit 26 41
  Pseudomonas sp. DMC3 GFF3900 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 25 65
  Shewanella amazonensis SB2B Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) strong 25 50
  Rhodopseudomonas palustris CGA009 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 24 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO sig. 26 41
  Pseudomonas sp. SVBP6 COO64_RS15510 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 65
  Dickeya dadantii 3937 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 21 80
  Shewanella loihica PV-4 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 24 53
  Pseudomonas sp. RS175 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 23 65
  Dickeya dianthicola ME23 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 52
  Rahnella sp. WP5 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 67
  Methylophilus sp. DMC18 GFF1218 Ribosomal protein S12 methylthiotransferase RimO insig. 25 68
  Pseudomonas aeruginosa MRSN321 DY961_RS12950 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 66
  Pseudomonas aeruginosa PA14 IKLFDK_20540 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 23 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS48275 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 66
  Rhizobium sp. OAE497 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 24 60
  Dickeya dianthicola 67-19 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 23 49
  Magnetospirillum magneticum AMB-1 AMB_RS18520 B12-binding domain-containing radical SAM protein insig. 25 59
  Pseudomonas stutzeri RCH2 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 23 66
  Fusobacterium nucleatum SB010 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 29 45
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase strong 26 48
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 24 50
  Ralstonia solanacearum UW163 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 24 50
  Mycobacterium tuberculosis H37Rv Rv2733c Conserved hypothetical alanine, arginine-rich protein sig. 26 42
  Xanthobacter sp. DMC5 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 26 58
  Rhodospirillum rubrum S1H Rru_A3548 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) strong 25 62
  Pectobacterium carotovorum WPP14 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 25 50
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13125 B12-binding domain-containing radical SAM protein insig. 24 79
  Shewanella oneidensis MR-1 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) strong 23 53
  Bifidobacterium breve UCC2003 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 22 53
  Acinetobacter radioresistens SK82 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO strong 27 53
  Paraburkholderia graminis OAS925 ABIE53_001028 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 26 47
  Shewanella sp. ANA-3 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) sig. 25 68
  Methylophilus sp. DMC18 GFF2710 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 25 64
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04300 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 25 44
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO insig. 23 85
  Pseudomonas sp. S08-1 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 22 66
  Burkholderia phytofirmans PsJN BPHYT_RS10915 radical SAM protein insig. 25 62
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01152 hopanoid biosynthesis associated radical SAM protein HpnJ no data 26 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO insig. 25 70
  Shewanella sp. ANA-3 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 23 57
  Caulobacter crescentus NA1000 CCNA_00054 tRNA 2-methylthioadenosine synthase strong 25 61
  Caulobacter crescentus NA1000 Δfur CCNA_00054 tRNA 2-methylthioadenosine synthase cofit 25 61
  Klebsiella michiganensis M5al BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 25 50
  Vibrio cholerae E7946 ATCC 55056 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 24 49
  Paraburkholderia sabiae LMG 24235 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 24 50
  Lysobacter sp. OAE881 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 24 47
  Pseudomonas sp. RS175 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO insig. 25 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05095 B12-binding domain-containing radical SAM protein insig. 25 65
  Pseudomonas segetis P6 ACVTMO_RS05310 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 25 49
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08260 30S ribosomal protein S12 methylthiotransferase RimO insig. 23 62
  Rhodospirillum rubrum S1H Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) strong 22 67
  Pseudomonas sp. DMC3 GFF2126 Ribosomal protein S12 methylthiotransferase RimO insig. 25 49
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05340 B12-binding domain-containing radical SAM protein insig. 24 78
  Dickeya dadantii 3937 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO insig. 27 47
  Cupriavidus basilensis FW507-4G11 RR42_RS35285 hopanoid biosynthesis associated radical SAM protein HpnJ insig. 26 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 25 49
  Synechococcus elongatus PCC 7942 Synpcc7942_1621 Elongator protein 3/MiaB/NifB no data 25 70
  Castellaniella sp019104865 MT123 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 23 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3163.1 Radical SAM domain protein insig. 23 66
  Erwinia amylovora T8 OLJFJH_17145 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 25 50
  Klebsiella pneumoniae MKP103 KDGMDA_16495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 25 50
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00545 B12-binding domain-containing radical SAM protein insig. 24 44
  Synechocystis sp000284455 PCC 6803 SGL_RS15935 radical SAM protein insig. 22 85
  Escherichia coli BL21 ECD_00629 tRNA-i(6)A37 methylthiotransferase strong 25 50
  Escherichia coli ECOR27 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 25 50